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  5. Sobic.002G043300.2

Sobic.002G043300.2


Description : Qa-type SYP1-group component of SNARE membrane fusion complex


Gene families : OG_42_0000336 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000336_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.002G043300.2

Target Alias Description ECC score Gene Family Method Actions
25349 No alias syntaxin of plants 124 0.02 Orthogroups_2024-Update
Brara.C03386.1 No alias Qa-type SYP1-group component of SNARE membrane fusion complex 0.02 Orthogroups_2024-Update
GRMZM2G095441 No alias syntaxin of plants 124 0.02 Orthogroups_2024-Update
Glyma.13G307600 No alias syntaxin of plants 131 0.03 Orthogroups_2024-Update
Potri.007G023100 No alias syntaxin of plants 112 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA 16Dec
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Type GO Term Name Evidence Source
BP GO:0006996 organelle organization IEP Predicted GO
BP GO:0007010 cytoskeleton organization IEP Predicted GO
MF GO:0008017 microtubule binding IEP Predicted GO
MF GO:0008092 cytoskeletal protein binding IEP Predicted GO
MF GO:0015631 tubulin binding IEP Predicted GO
InterPro domains Description Start Stop
IPR000727 T_SNARE_dom 241 293
IPR006011 Syntaxin_N 37 240
No external refs found!