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  5. Sobic.002G043700.1

Sobic.002G043700.1


Description : Unknown function


Gene families : OG_42_0000144 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000144_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.002G043700.1
Cluster HCAA Clusters: Cluster_109

Target Alias Description ECC score Gene Family Method Actions
Bradi1g13460 No alias C2 calcium/lipid-binding plant phosphoribosyltransferase... 0.03 Orthogroups_2024-Update
GRMZM2G064852 No alias C2 calcium/lipid-binding plant phosphoribosyltransferase... 0.04 Orthogroups_2024-Update
MA_80358g0010 No alias (at5g12970 : 431.0) Calcium-dependent lipid-binding... 0.03 Orthogroups_2024-Update
Sobic.004G343800.1 No alias Unknown function 0.05 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004519 endonuclease activity IEP Predicted GO
MF GO:0004521 endoribonuclease activity IEP Predicted GO
MF GO:0004525 ribonuclease III activity IEP Predicted GO
MF GO:0004540 ribonuclease activity IEP Predicted GO
MF GO:0016891 endoribonuclease activity, producing 5'-phosphomonoesters IEP Predicted GO
MF GO:0016893 endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters IEP Predicted GO
MF GO:0032296 double-stranded RNA-specific ribonuclease activity IEP Predicted GO
BP GO:0032502 developmental process IEP Predicted GO
BP GO:0048364 root development IEP Predicted GO
BP GO:0048367 shoot system development IEP Predicted GO
BP GO:0048731 system development IEP Predicted GO
BP GO:0048856 anatomical structure development IEP Predicted GO
BP GO:0099402 plant organ development IEP Predicted GO
InterPro domains Description Start Stop
IPR000008 C2_dom 11 112
IPR000008 C2_dom 331 438
IPR000008 C2_dom 497 604
IPR000008 C2_dom 664 781
IPR013583 PRibTrfase_C 929 1079
No external refs found!