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  5. Sobic.002G049500.1

Sobic.002G049500.1


Description : arabinogalactan protein *(Xylogen)


Gene families : OG_42_0000300 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000300_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.002G049500.1
Cluster HCAA Clusters: Cluster_246

Target Alias Description ECC score Gene Family Method Actions
A4A49_12726 No alias hypothetical protein 0.03 Orthogroups_2024-Update
Bradi1g55770 No alias Bifunctional inhibitor/lipid-transfer protein/seed... 0.02 Orthogroups_2024-Update
Brara.B00307.1 No alias arabinogalactan protein *(Xylogen) 0.03 Orthogroups_2024-Update
GRMZM2G004466 No alias Bifunctional inhibitor/lipid-transfer protein/seed... 0.03 Orthogroups_2024-Update
GRMZM2G065640 No alias Bifunctional inhibitor/lipid-transfer protein/seed... 0.03 Orthogroups_2024-Update
Glyma.20G049800 No alias Bifunctional inhibitor/lipid-transfer protein/seed... 0.03 Orthogroups_2024-Update
LOC_Os05g41030 No alias LTPL67 - Protease inhibitor/seed storage/LTP family... 0.04 Orthogroups_2024-Update
MA_139470g0010 No alias no hits & (original description: no original description) 0.03 Orthogroups_2024-Update
PSME_00054093-RA No alias (at4g14815 : 85.5) Bifunctional inhibitor/lipid-transfer... 0.05 Orthogroups_2024-Update
Pp1s139_88V6 No alias Non-specific lipid-transfer protein 0.03 Orthogroups_2024-Update
Pp1s239_57V6 No alias F16J14.16; protease inhibitor/seed storage/lipid... 0.02 Orthogroups_2024-Update
Seita.9G130100.1 No alias arabinogalactan protein *(Xylogen) 0.08 Orthogroups_2024-Update
Sopen03g001220 No alias Probable lipid transfer 0.02 Orthogroups_2024-Update
Sopen09g031150 No alias Probable lipid transfer 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR016140 Bifunc_inhib/LTP/seed_store 25 114
No external refs found!