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  5. Sobic.002G051900.1

Sobic.002G051900.1


Description : transcriptional memory factor *(HsfA3) & HSF-type transcription factor


Gene families : OG_42_0000092 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000092_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.002G051900.1
Cluster HCAA Clusters: Cluster_165

Target Alias Description ECC score Gene Family Method Actions
Bradi4g32130 No alias heat shock factor 4 0.03 Orthogroups_2024-Update
Bradi5g18680 No alias heat shock transcription factor B2A 0.01 Orthogroups_2024-Update
GRMZM2G115456 No alias heat shock factor 3 0.01 Orthogroups_2024-Update
Glyma.01G015900 No alias heat shock transcription factor A1D 0.01 Orthogroups_2024-Update
PSME_00055440-RA No alias (at3g22830 : 268.0) member of Heat Stress Transcription... 0.02 Orthogroups_2024-Update
Potri.006G049200 No alias heat shock transcription factor B3 0.02 Orthogroups_2024-Update
Potri.015G141100 No alias heat shock transcription factor B2A 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEA 16Dec
BP GO:0006355 regulation of transcription, DNA-templated IEA 16Dec
MF GO:0043565 sequence-specific DNA binding IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0008194 UDP-glycosyltransferase activity IEP Predicted GO
InterPro domains Description Start Stop
IPR000232 HSF_DNA-bd 53 142
No external refs found!