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  5. Sobic.002G052100.1

Sobic.002G052100.1


Description : LHC-related protein *(ELIP)


Gene families : OG_42_0000421 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000421_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.002G052100.1
Cluster HCAA Clusters: Cluster_120

Target Alias Description ECC score Gene Family Method Actions
A4A49_24316 No alias early light-induced protein 1, chloroplastic 0.05 Orthogroups_2024-Update
A4A49_27530 No alias early light-induced protein 1, chloroplastic 0.05 Orthogroups_2024-Update
At3g22840 No alias ELIP1 [Source:UniProtKB/TrEMBL;Acc:A0A178VCA8] 0.03 Orthogroups_2024-Update
At4g14690 No alias Early light-induced protein 2, chloroplastic... 0.04 Orthogroups_2024-Update
Bradi1g55560 No alias Chlorophyll A-B binding family protein 0.04 Orthogroups_2024-Update
Bradi1g55600 No alias Chlorophyll A-B binding family protein 0.04 Orthogroups_2024-Update
Bradi1g55620 No alias Chlorophyll A-B binding family protein 0.04 Orthogroups_2024-Update
Brara.A02698.1 No alias LHC-related protein *(ELIP) 0.04 Orthogroups_2024-Update
Cre08.g384650 No alias Chlorophyll A-B binding family protein 0.01 Orthogroups_2024-Update
Cre14.g626750 No alias Chlorophyll A-B binding family protein 0.01 Orthogroups_2024-Update
Cre16.g679250 No alias Chlorophyll A-B binding family protein 0.01 Orthogroups_2024-Update
Glyma.10G243800 No alias Chlorophyll A-B binding family protein 0.05 Orthogroups_2024-Update
Glyma.20G150600 No alias Chlorophyll A-B binding family protein 0.03 Orthogroups_2024-Update
HORVU0Hr1G008960.2 No alias LHC-related protein *(ELIP) 0.05 Orthogroups_2024-Update
HORVU0Hr1G013030.2 No alias LHC-related protein *(ELIP) 0.06 Orthogroups_2024-Update
HORVU0Hr1G023360.2 No alias LHC-related protein *(ELIP) 0.03 Orthogroups_2024-Update
HORVU0Hr1G038220.1 No alias LHC-related protein *(ELIP) 0.04 Orthogroups_2024-Update
HORVU1Hr1G067080.3 No alias LHC-related protein *(ELIP) 0.06 Orthogroups_2024-Update
HORVU1Hr1G087740.1 No alias LHC-related protein *(ELIP) 0.05 Orthogroups_2024-Update
HORVU4Hr1G063190.1 No alias LHC-related protein *(ELIP) 0.03 Orthogroups_2024-Update
HORVU4Hr1G066740.1 No alias LHC-related protein *(ELIP) 0.05 Orthogroups_2024-Update
HORVU4Hr1G066800.8 No alias LHC-related protein *(ELIP) 0.05 Orthogroups_2024-Update
HORVU4Hr1G066810.7 No alias LHC-related protein *(ELIP) 0.05 Orthogroups_2024-Update
HORVU5Hr1G000620.2 No alias LHC-related protein *(ELIP) 0.06 Orthogroups_2024-Update
HORVU5Hr1G063570.1 No alias LHC-related protein *(ELIP) 0.04 Orthogroups_2024-Update
HORVU5Hr1G063590.1 No alias LHC-related protein *(ELIP) 0.03 Orthogroups_2024-Update
HORVU5Hr1G063620.1 No alias LHC-related protein *(ELIP) 0.05 Orthogroups_2024-Update
HORVU5Hr1G063630.3 No alias LHC-related protein *(ELIP) 0.06 Orthogroups_2024-Update
HORVU5Hr1G063650.1 No alias LHC-related protein *(ELIP) 0.06 Orthogroups_2024-Update
HORVU5Hr1G063660.1 No alias LHC-related protein *(ELIP) 0.05 Orthogroups_2024-Update
HORVU5Hr1G063670.1 No alias LHC-related protein *(ELIP) 0.05 Orthogroups_2024-Update
MA_10432802g0010 No alias (p11432|eli_pea : 172.0) Early light-induced protein,... 0.04 Orthogroups_2024-Update
Mp6g14520.1 No alias ELIP LHC-related protein 0.04 Orthogroups_2024-Update
PSME_00018672-RA No alias no hits & (original description: no original description) 0.02 Orthogroups_2024-Update
Pp1s262_24V6 No alias elip2.2 gene for putative early light-induced protein ELIP2.2 0.02 Orthogroups_2024-Update
Seita.2G053300.1 No alias LHC-related protein *(ELIP) 0.08 Orthogroups_2024-Update
Seita.2G053700.1 No alias LHC-related protein *(ELIP) 0.07 Orthogroups_2024-Update
Seita.2G053800.1 No alias LHC-related protein *(ELIP) 0.08 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004619 phosphoglycerate mutase activity IEP Predicted GO
MF GO:0005215 transporter activity IEP Predicted GO
BP GO:0006006 glucose metabolic process IEP Predicted GO
BP GO:0006007 glucose catabolic process IEP Predicted GO
MF GO:0008194 UDP-glycosyltransferase activity IEP Predicted GO
MF GO:0010309 acireductone dioxygenase [iron(II)-requiring] activity IEP Predicted GO
MF GO:0015267 channel activity IEP Predicted GO
MF GO:0016868 intramolecular transferase activity, phosphotransferases IEP Predicted GO
BP GO:0019320 hexose catabolic process IEP Predicted GO
MF GO:0022803 passive transmembrane transporter activity IEP Predicted GO
MF GO:0022857 transmembrane transporter activity IEP Predicted GO
MF GO:0030145 manganese ion binding IEP Predicted GO
BP GO:0046365 monosaccharide catabolic process IEP Predicted GO
BP GO:0055085 transmembrane transport IEP Predicted GO
InterPro domains Description Start Stop
IPR022796 Chloroa_b-bind 149 178
IPR022796 Chloroa_b-bind 70 138
No external refs found!