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  5. Sobic.002G055900.1

Sobic.002G055900.1


Description : transcriptional repressor *(IAA/AUX)


Gene families : OG_42_0000083 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000083_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.002G055900.1
Cluster HCAA Clusters: Cluster_8

Target Alias Description ECC score Gene Family Method Actions
85035 No alias indole-3-acetic acid inducible 9 0.06 Orthogroups_2024-Update
At1g04250 No alias Auxin-responsive protein IAA17... 0.02 Orthogroups_2024-Update
At1g04550 No alias Auxin-responsive protein IAA12... 0.04 Orthogroups_2024-Update
Bradi2g04910 No alias AUX/IAA transcriptional regulator family protein 0.02 Orthogroups_2024-Update
Bradi2g34030 No alias AUX/IAA transcriptional regulator family protein 0.05 Orthogroups_2024-Update
Bradi2g46420 No alias phytochrome-associated protein 2 0.02 Orthogroups_2024-Update
Glyma.01G039300 No alias indoleacetic acid-induced protein 8 0.04 Orthogroups_2024-Update
Glyma.02G000500 No alias AUX/IAA transcriptional regulator family protein 0.03 Orthogroups_2024-Update
Glyma.03G158600 No alias AUX/IAA transcriptional regulator family protein 0.03 Orthogroups_2024-Update
Glyma.03G158700 No alias indole-3-acetic acid inducible 14 0.02 Orthogroups_2024-Update
Glyma.10G031800 No alias AUX/IAA transcriptional regulator family protein 0.03 Orthogroups_2024-Update
Glyma.10G180000 No alias AUX/IAA transcriptional regulator family protein 0.04 Orthogroups_2024-Update
Glyma.13G361200 No alias AUX/IAA transcriptional regulator family protein 0.02 Orthogroups_2024-Update
Glyma.19G161100 No alias indole-3-acetic acid inducible 14 0.06 Orthogroups_2024-Update
Glyma.20G210400 No alias indole-3-acetic acid inducible 14 0.02 Orthogroups_2024-Update
HORVU1Hr1G086070.6 No alias transcriptional repressor *(IAA/AUX) 0.04 Orthogroups_2024-Update
PSME_00003825-RA No alias (at2g33310 : 112.0) Auxin induced gene, IAA13 (IAA13).;... 0.06 Orthogroups_2024-Update
Potri.008G161100 No alias AUX/IAA transcriptional regulator family protein 0.02 Orthogroups_2024-Update
Solyc04g054280 No alias auxin-related IAA23 0.03 Orthogroups_2024-Update
Solyc06g053830 No alias auxin-regulated IAA7 0.02 Orthogroups_2024-Update
Solyc09g083290 No alias auxin-regulated IAA14 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0005576 extracellular region IEP Predicted GO
CC GO:0005618 cell wall IEP Predicted GO
BP GO:0005976 polysaccharide metabolic process IEP Predicted GO
BP GO:0006073 cellular glucan metabolic process IEP Predicted GO
MF GO:0016762 xyloglucan:xyloglucosyl transferase activity IEP Predicted GO
CC GO:0030312 external encapsulating structure IEP Predicted GO
BP GO:0044042 glucan metabolic process IEP Predicted GO
BP GO:0044262 cellular carbohydrate metabolic process IEP Predicted GO
BP GO:0044264 cellular polysaccharide metabolic process IEP Predicted GO
MF GO:0046527 glucosyltransferase activity IEP Predicted GO
CC GO:0048046 apoplast IEP Predicted GO
InterPro domains Description Start Stop
IPR033389 AUX/IAA_dom 12 198
No external refs found!