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  5. Sobic.002G060450.1

Sobic.002G060450.1


Description : Unknown function


Gene families : OG_42_0000239 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000239_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.002G060450.1
Cluster HCAA Clusters: Cluster_187

Target Alias Description ECC score Gene Family Method Actions
Bradi2g16380 No alias F-box family protein 0.03 Orthogroups_2024-Update
HORVU1Hr1G002290.1 No alias Unknown function 0.04 Orthogroups_2024-Update
HORVU3Hr1G098640.9 No alias Unknown function 0.04 Orthogroups_2024-Update
LOC_Os05g08460 No alias OsFBX164 - F-box domain containing protein, expressed 0.04 Orthogroups_2024-Update
Seita.2G063300.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Seita.3G396500.1 No alias Unknown function 0.05 Orthogroups_2024-Update
Seita.5G115700.1 No alias Unknown function 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA 16Dec
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Type GO Term Name Evidence Source
CC GO:0000786 nucleosome IEP Predicted GO
MF GO:0003690 double-stranded DNA binding IEP Predicted GO
BP GO:0006325 chromatin organization IEP Predicted GO
BP GO:0006334 nucleosome assembly IEP Predicted GO
BP GO:0022607 cellular component assembly IEP Predicted GO
CC GO:0032993 protein-DNA complex IEP Predicted GO
BP GO:0034622 cellular protein-containing complex assembly IEP Predicted GO
BP GO:0034728 nucleosome organization IEP Predicted GO
BP GO:0043933 protein-containing complex subunit organization IEP Predicted GO
CC GO:0044427 chromosomal part IEP Predicted GO
CC GO:0044815 DNA packaging complex IEP Predicted GO
BP GO:0065003 protein-containing complex assembly IEP Predicted GO
BP GO:0065004 protein-DNA complex assembly IEP Predicted GO
BP GO:0071824 protein-DNA complex subunit organization IEP Predicted GO
InterPro domains Description Start Stop
IPR001810 F-box_dom 3 38
No external refs found!