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  5. Sobic.002G061800.2

Sobic.002G061800.2


Description : Unknown function


Gene families : OG_42_0000134 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000134_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.002G061800.2
Cluster HCAA Clusters: Cluster_185

Target Alias Description ECC score Gene Family Method Actions
At5g21150 No alias Protein argonaute 9 [Source:UniProtKB/Swiss-Prot;Acc:Q84VQ0] 0.04 Orthogroups_2024-Update
Glyma.01G053100 No alias Argonaute family protein 0.03 Orthogroups_2024-Update
Potri.001G219700 No alias Argonaute family protein 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA 16Dec
MF GO:0005515 protein binding IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0003774 motor activity IEP Predicted GO
MF GO:0003777 microtubule motor activity IEP Predicted GO
BP GO:0006352 DNA-templated transcription, initiation IEP Predicted GO
BP GO:0006928 movement of cell or subcellular component IEP Predicted GO
BP GO:0007017 microtubule-based process IEP Predicted GO
BP GO:0007018 microtubule-based movement IEP Predicted GO
MF GO:0008017 microtubule binding IEP Predicted GO
MF GO:0008092 cytoskeletal protein binding IEP Predicted GO
MF GO:0015631 tubulin binding IEP Predicted GO
MF GO:0016757 transferase activity, transferring glycosyl groups IEP Predicted GO
InterPro domains Description Start Stop
IPR032474 Argonaute_N 52 178
IPR032473 Argonaute_Mid_dom 436 511
IPR032472 ArgoL2 379 425
IPR003165 Piwi 521 838
IPR003100 PAZ_dom 266 370
IPR014811 ArgoL1 190 238
No external refs found!