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  5. Sobic.002G064500.1

Sobic.002G064500.1


Description : 1-deoxy-D-xylulose 5-phosphate synthase *(DXS) & EC_2.2 transferase transferring aldehyde or ketonic group


Gene families : OG_42_0001316 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001316_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.002G064500.1
Cluster HCAA Clusters: Cluster_231

Target Alias Description ECC score Gene Family Method Actions
Glyma.09G200500 No alias Deoxyxylulose-5-phosphate synthase 0.03 Orthogroups_2024-Update
Glyma.13G093866 No alias Deoxyxylulose-5-phosphate synthase 0.02 Orthogroups_2024-Update
HORVU1Hr1G084900.9 No alias 1-deoxy-D-xylulose 5-phosphate synthase *(DXS) & EC_2.2... 0.05 Orthogroups_2024-Update
Mp2g09130.1 No alias 1-deoxy-D-xylulose 5-phosphate synthase (DXS) 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0008661 1-deoxy-D-xylulose-5-phosphate synthase activity IEA 16Dec
BP GO:0016114 terpenoid biosynthetic process IEA 16Dec
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR005475 Transketolase-like_Pyr-bd 410 571
IPR005477 Dxylulose-5-P_synthase 88 373
IPR033248 Transketolase_C 589 712
No external refs found!