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  5. Sobic.002G065600.2

Sobic.002G065600.2


Description : EC_4.2 carbon-oxygen lyase & mono-/sesquiterpene-/diterpene synthase


Gene families : OG_42_0000137 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000137_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.002G065600.2
Cluster HCAA Clusters: Cluster_21

Target Alias Description ECC score Gene Family Method Actions
A4A49_36773 No alias germacrene c synthase 0.03 Orthogroups_2024-Update
Bradi3g14710 No alias terpene synthase 02 0.02 Orthogroups_2024-Update
Brara.F02619.1 No alias EC_4.2 carbon-oxygen lyase &... 0.02 Orthogroups_2024-Update
GRMZM2G084496 No alias terpene synthase 21 0.03 Orthogroups_2024-Update
HORVU5Hr1G004700.3 No alias EC_4.2 carbon-oxygen lyase &... 0.03 Orthogroups_2024-Update
LOC_Os01g42610 No alias terpene synthase, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os04g27430 No alias terpene synthase, putative, expressed 0.03 Orthogroups_2024-Update
Seita.6G048400.1 No alias EC_4.2 carbon-oxygen lyase &... 0.03 Orthogroups_2024-Update
Seita.6G048800.1 No alias EC_4.2 carbon-oxygen lyase &... 0.04 Orthogroups_2024-Update
Seita.7G146000.1 No alias EC_4.2 carbon-oxygen lyase &... 0.04 Orthogroups_2024-Update
Seita.8G192000.1 No alias EC_4.2 carbon-oxygen lyase &... 0.04 Orthogroups_2024-Update
Sobic.001G339000.1 No alias EC_4.2 carbon-oxygen lyase &... 0.02 Orthogroups_2024-Update
Sobic.007G035800.1 No alias EC_4.2 carbon-oxygen lyase &... 0.04 Orthogroups_2024-Update
Sobic.007G055500.1 No alias EC_4.2 carbon-oxygen lyase &... 0.03 Orthogroups_2024-Update
Sobic.007G187100.1 No alias EC_4.2 carbon-oxygen lyase &... 0.02 Orthogroups_2024-Update
Solyc01g101210 No alias viridiflorene synthase 0.02 Orthogroups_2024-Update
Solyc06g059910 No alias No description available 0.04 Orthogroups_2024-Update
Solyc06g059930 No alias sesquiterpene synthase 1 0.05 Orthogroups_2024-Update
Solyc07g051940 No alias Sesquiterpene synthase (AHRD V3.3 *** G8H5N2_SOLHA) 0.05 Orthogroups_2024-Update
Solyc12g006570 No alias Sesquiterpene synthase (AHRD V3.3 *** G5CV52_SOLLC) 0.07 Orthogroups_2024-Update
Sopen01g044650 No alias Terpene synthase family, metal binding domain 0.04 Orthogroups_2024-Update
Sopen09g010750 No alias Terpene synthase family, metal binding domain 0.02 Orthogroups_2024-Update
Sopen12g002520 No alias Terpene synthase family, metal binding domain 0.05 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0000287 magnesium ion binding IEA 16Dec
MF GO:0010333 terpene synthase activity IEA 16Dec
MF GO:0016829 lyase activity IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0008146 sulfotransferase activity IEP Predicted GO
BP GO:0009116 nucleoside metabolic process IEP Predicted GO
MF GO:0015276 ligand-gated ion channel activity IEP Predicted GO
MF GO:0016782 transferase activity, transferring sulfur-containing groups IEP Predicted GO
MF GO:0022834 ligand-gated channel activity IEP Predicted GO
MF GO:0022836 gated channel activity IEP Predicted GO
MF GO:0022839 ion gated channel activity IEP Predicted GO
BP GO:1901657 glycosyl compound metabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR005630 Terpene_synthase_metal-bd 190 286
IPR001906 Terpene_synth_N 2 159
No external refs found!