Sobic.002G067000.1

Description : Unknown function

Gene families : OG_42_0000080 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000080_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Sorghum bicolor: Sobic.002G067000.1
Cluster	HCAA Clusters: Cluster_249

Target	Alias	Description	ECC score	Gene Family Method
At3g28510	No alias	AAA-ATPase At3g28510 [Source:UniProtKB/Swiss-Prot;Acc:Q9LH84]	0.03	Orthogroups_2024-Update
Bradi4g30930	No alias	P-loop containing nucleoside triphosphate hydrolases...	0.03	Orthogroups_2024-Update
Brara.B00729.1	No alias	Unknown function	0.03	Orthogroups_2024-Update
GRMZM2G138770	No alias	AAA-ATPase 1	0.02	Orthogroups_2024-Update
GRMZM5G893912	No alias	AAA-ATPase 1	0.02	Orthogroups_2024-Update
Glyma.12G229000	No alias	cytochrome BC1 synthesis	0.04	Orthogroups_2024-Update
Glyma.18G254100	No alias	AAA-ATPase 1	0.03	Orthogroups_2024-Update
Glyma.18G254200	No alias	AAA-ATPase 1	0.04	Orthogroups_2024-Update
LOC_Os01g19260	No alias	ATPase, putative, expressed	0.02	Orthogroups_2024-Update
MA_10435321g0020	No alias	(at5g57480 : 572.0) P-loop containing nucleoside...	0.03	Orthogroups_2024-Update
MA_10435468g0010	No alias	(at3g28510 : 210.0) P-loop containing nucleoside...	0.03	Orthogroups_2024-Update
MA_296237g0010	No alias	(at5g57480 : 91.7) P-loop containing nucleoside...	0.03	Orthogroups_2024-Update
MA_296237g0020	No alias	(at3g50930 : 157.0) cytochrome BC1 synthesis (BCS1);...	0.05	Orthogroups_2024-Update
MA_354684g0010	No alias	(at3g28510 : 341.0) P-loop containing nucleoside...	0.02	Orthogroups_2024-Update
MA_69227g0010	No alias	(at5g57480 : 537.0) P-loop containing nucleoside...	0.03	Orthogroups_2024-Update
PSME_00011756-RA	No alias	(at4g30250 : 363.0) P-loop containing nucleoside...	0.03	Orthogroups_2024-Update
PSME_00029894-RA	No alias	(at5g57480 : 373.0) P-loop containing nucleoside...	0.03	Orthogroups_2024-Update
PSME_00046806-RA	No alias	(at3g28580 : 407.0) P-loop containing nucleoside...	0.03	Orthogroups_2024-Update
Potri.004G012500	No alias	AAA-ATPase 1	0.05	Orthogroups_2024-Update
Potri.004G012700	No alias	AAA-ATPase 1	0.03	Orthogroups_2024-Update
Potri.005G119200	No alias	P-loop containing nucleoside triphosphate hydrolases...	0.03	Orthogroups_2024-Update
Potri.007G020500	No alias	P-loop containing nucleoside triphosphate hydrolases...	0.04	Orthogroups_2024-Update
Potri.008G177200	No alias	P-loop containing nucleoside triphosphate hydrolases...	0.03	Orthogroups_2024-Update
Potri.T171900	No alias	cytochrome BC1 synthesis	0.05	Orthogroups_2024-Update
Potri.T172000	No alias	cytochrome BC1 synthesis	0.06	Orthogroups_2024-Update
Pp1s325_27V6	No alias	atp binding	0.03	Orthogroups_2024-Update
Seita.3G407200.1	No alias	Unknown function	0.04	Orthogroups_2024-Update
Seita.4G245200.1	No alias	Unknown function	0.03	Orthogroups_2024-Update
Sobic.010G247300.1	No alias	Unknown function	0.02	Orthogroups_2024-Update
Sopen03g006560	No alias	Domain associated at C-terminal with AAA	0.03	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	16Dec
MF	GO:0008144	drug binding	None	Extended
MF	GO:0016462	pyrophosphatase activity	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016817	hydrolase activity, acting on acid anhydrides	None	Extended
MF	GO:0016818	hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	None	Extended
MF	GO:0016887	ATPase activity	IEA	16Dec
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0017111	nucleoside-triphosphatase activity	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003723	RNA binding	IEP	Predicted GO
MF	GO:0003743	translation initiation factor activity	IEP	Predicted GO
MF	GO:0003872	6-phosphofructokinase activity	IEP	Predicted GO
BP	GO:0005975	carbohydrate metabolic process	IEP	Predicted GO
BP	GO:0006072	glycerol-3-phosphate metabolic process	IEP	Predicted GO
BP	GO:0006090	pyruvate metabolic process	IEP	Predicted GO
BP	GO:0006096	glycolytic process	IEP	Predicted GO
BP	GO:0006165	nucleoside diphosphate phosphorylation	IEP	Predicted GO
BP	GO:0006733	oxidoreduction coenzyme metabolic process	IEP	Predicted GO
BP	GO:0006757	ATP generation from ADP	IEP	Predicted GO
BP	GO:0007059	chromosome segregation	IEP	Predicted GO
MF	GO:0008135	translation factor activity, RNA binding	IEP	Predicted GO
MF	GO:0008443	phosphofructokinase activity	IEP	Predicted GO
BP	GO:0009056	catabolic process	IEP	Predicted GO
BP	GO:0009132	nucleoside diphosphate metabolic process	IEP	Predicted GO
BP	GO:0009135	purine nucleoside diphosphate metabolic process	IEP	Predicted GO
BP	GO:0009166	nucleotide catabolic process	IEP	Predicted GO
BP	GO:0009179	purine ribonucleoside diphosphate metabolic process	IEP	Predicted GO
BP	GO:0009185	ribonucleoside diphosphate metabolic process	IEP	Predicted GO
MF	GO:0019200	carbohydrate kinase activity	IEP	Predicted GO
BP	GO:0019359	nicotinamide nucleotide biosynthetic process	IEP	Predicted GO
BP	GO:0019362	pyridine nucleotide metabolic process	IEP	Predicted GO
BP	GO:0019363	pyridine nucleotide biosynthetic process	IEP	Predicted GO
BP	GO:0019637	organophosphate metabolic process	IEP	Predicted GO
BP	GO:0034404	nucleobase-containing small molecule biosynthetic process	IEP	Predicted GO
BP	GO:0042866	pyruvate biosynthetic process	IEP	Predicted GO
BP	GO:0046031	ADP metabolic process	IEP	Predicted GO
BP	GO:0046168	glycerol-3-phosphate catabolic process	IEP	Predicted GO
BP	GO:0046434	organophosphate catabolic process	IEP	Predicted GO
BP	GO:0046496	nicotinamide nucleotide metabolic process	IEP	Predicted GO
BP	GO:0046939	nucleotide phosphorylation	IEP	Predicted GO
MF	GO:0047952	glycerol-3-phosphate dehydrogenase [NAD(P)+] activity	IEP	Predicted GO
BP	GO:0051301	cell division	IEP	Predicted GO
BP	GO:0052646	alditol phosphate metabolic process	IEP	Predicted GO
BP	GO:0072524	pyridine-containing compound metabolic process	IEP	Predicted GO
BP	GO:0072525	pyridine-containing compound biosynthetic process	IEP	Predicted GO
BP	GO:1901135	carbohydrate derivative metabolic process	IEP	Predicted GO
BP	GO:1901136	carbohydrate derivative catabolic process	IEP	Predicted GO
BP	GO:1901292	nucleoside phosphate catabolic process	IEP	Predicted GO
BP	GO:1901575	organic substance catabolic process	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR003959	ATPase_AAA_core	274	423
IPR025753	AAA_N_dom	44	140

External Links

No external refs found!

Sobic.002G067000.1

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation