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  5. Sobic.002G076600.1

Sobic.002G076600.1


Description : bHLH-type transcription factor


Gene families : OG_42_0001550 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001550_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.002G076600.1
Cluster HCAA Clusters: Cluster_34

Target Alias Description ECC score Gene Family Method Actions
At4g09820 No alias Transcription factor TT8 [Source:UniProtKB/Swiss-Prot;Acc:Q9FT81] 0.02 Orthogroups_2024-Update
PSME_00022099-RA No alias (at4g09820 : 225.0) TT8 is a regulation factor that acts... 0.03 Orthogroups_2024-Update
Potri.014G083900 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.03 Orthogroups_2024-Update
Seita.5G411500.1 No alias bHLH-type transcription factor 0.03 Orthogroups_2024-Update
Solyc09g065100 No alias bHLH transcription factor 150 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0046983 protein dimerization activity IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0005507 copper ion binding IEP Predicted GO
BP GO:0006308 DNA catabolic process IEP Predicted GO
MF GO:0008270 zinc ion binding IEP Predicted GO
MF GO:0046914 transition metal ion binding IEP Predicted GO
MF GO:0050660 flavin adenine dinucleotide binding IEP Predicted GO
InterPro domains Description Start Stop
IPR025610 MYC/MYB_N 10 171
IPR011598 bHLH_dom 462 509
No external refs found!