Description : methylation reader Alfin of PRC1 complex
Gene families : OG_42_0000222 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000222_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | Sorghum bicolor: Sobic.002G083400.1 | |
Cluster | HCAA Clusters: Cluster_125 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
GRMZM2G008259 | No alias | alfin-like 7 | 0.03 | Orthogroups_2024-Update | |
Sopen06g022310 | No alias | Domain of unknown function (DUF3594) | 0.02 | Orthogroups_2024-Update |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0006355 | regulation of transcription, DNA-templated | IEA | 16Dec |
MF | GO:0042393 | histone binding | IEA | 16Dec |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0000350 | generation of catalytic spliceosome for second transesterification step | IEP | Predicted GO |
MF | GO:0003723 | RNA binding | IEP | Predicted GO |
MF | GO:0004559 | alpha-mannosidase activity | IEP | Predicted GO |
MF | GO:0004616 | phosphogluconate dehydrogenase (decarboxylating) activity | IEP | Predicted GO |
CC | GO:0005643 | nuclear pore | IEP | Predicted GO |
BP | GO:0005996 | monosaccharide metabolic process | IEP | Predicted GO |
BP | GO:0006013 | mannose metabolic process | IEP | Predicted GO |
BP | GO:0006081 | cellular aldehyde metabolic process | IEP | Predicted GO |
BP | GO:0006098 | pentose-phosphate shunt | IEP | Predicted GO |
BP | GO:0006139 | nucleobase-containing compound metabolic process | IEP | Predicted GO |
BP | GO:0006364 | rRNA processing | IEP | Predicted GO |
BP | GO:0006396 | RNA processing | IEP | Predicted GO |
BP | GO:0006694 | steroid biosynthetic process | IEP | Predicted GO |
BP | GO:0006739 | NADP metabolic process | IEP | Predicted GO |
BP | GO:0008202 | steroid metabolic process | IEP | Predicted GO |
MF | GO:0015923 | mannosidase activity | IEP | Predicted GO |
BP | GO:0016072 | rRNA metabolic process | IEP | Predicted GO |
BP | GO:0016125 | sterol metabolic process | IEP | Predicted GO |
BP | GO:0016126 | sterol biosynthetic process | IEP | Predicted GO |
MF | GO:0016627 | oxidoreductase activity, acting on the CH-CH group of donors | IEP | Predicted GO |
MF | GO:0016628 | oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor | IEP | Predicted GO |
BP | GO:0019318 | hexose metabolic process | IEP | Predicted GO |
BP | GO:0019682 | glyceraldehyde-3-phosphate metabolic process | IEP | Predicted GO |
MF | GO:0019843 | rRNA binding | IEP | Predicted GO |
BP | GO:0022618 | ribonucleoprotein complex assembly | IEP | Predicted GO |
BP | GO:0034470 | ncRNA processing | IEP | Predicted GO |
BP | GO:0034660 | ncRNA metabolic process | IEP | Predicted GO |
MF | GO:0043015 | gamma-tubulin binding | IEP | Predicted GO |
MF | GO:0050661 | NADP binding | IEP | Predicted GO |
BP | GO:0051156 | glucose 6-phosphate metabolic process | IEP | Predicted GO |
BP | GO:0071826 | ribonucleoprotein complex subunit organization | IEP | Predicted GO |
BP | GO:1901360 | organic cyclic compound metabolic process | IEP | Predicted GO |
BP | GO:1901615 | organic hydroxy compound metabolic process | IEP | Predicted GO |
BP | GO:1901617 | organic hydroxy compound biosynthetic process | IEP | Predicted GO |
No external refs found! |