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  5. Sobic.002G083500.1

Sobic.002G083500.1


Description : Unknown function


Gene families : OG_42_0000187 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000187_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.002G083500.1
Cluster HCAA Clusters: Cluster_69

Target Alias Description ECC score Gene Family Method Actions
Bradi1g18537 No alias F-box/RNI-like superfamily protein 0.04 Orthogroups_2024-Update
Bradi4g22862 No alias FBD, F-box and Leucine Rich Repeat domains containing protein 0.05 Orthogroups_2024-Update
LOC_Os10g03620 No alias OsFBX344 - F-box domain containing protein, expressed 0.03 Orthogroups_2024-Update
LOC_Os10g03690 No alias OsFBX346 - F-box domain containing protein, expressed 0.03 Orthogroups_2024-Update
LOC_Os11g09478 No alias OsFBX402 - F-box domain containing protein, expressed 0.02 Orthogroups_2024-Update
LOC_Os11g10250 No alias expressed protein 0.02 Orthogroups_2024-Update
Seita.7G106400.1 No alias Unknown function 0.05 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA 16Dec
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Type GO Term Name Evidence Source
CC GO:0005667 transcription factor complex IEP Predicted GO
CC GO:0005669 transcription factor TFIID complex IEP Predicted GO
BP GO:0006352 DNA-templated transcription, initiation IEP Predicted GO
BP GO:0032774 RNA biosynthetic process IEP Predicted GO
CC GO:0044428 nuclear part IEP Predicted GO
CC GO:0044451 nucleoplasm part IEP Predicted GO
CC GO:0044798 nuclear transcription factor complex IEP Predicted GO
CC GO:0090575 RNA polymerase II transcription factor complex IEP Predicted GO
InterPro domains Description Start Stop
IPR001810 F-box_dom 38 75
No external refs found!