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  5. Sobic.002G084300.3

Sobic.002G084300.3


Description : E-class RAB GTPase


Gene families : OG_42_0001071 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001071_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.002G084300.3
Cluster HCAA Clusters: Cluster_83

Target Alias Description ECC score Gene Family Method Actions
Bradi2g23120 No alias RAB GTPase homolog 8A 0.02 Orthogroups_2024-Update
Cre15.g641800 No alias RAB GTPase homolog 8 0.03 Orthogroups_2024-Update
Kfl00246_0010 kfl00246_0010_v1.1 (q39433|rb1bv_betvu : 311.0) Ras-related protein RAB1BV... 0.02 Orthogroups_2024-Update
MA_10431596g0010 No alias (at3g46060 : 293.0) small GTP-binding protein (ara-3);... 0.02 Orthogroups_2024-Update
Mp4g20100.1 No alias E-class RAB GTPase 0.02 Orthogroups_2024-Update
Pp1s81_37V6 No alias small gtp-binding protein 0.02 Orthogroups_2024-Update
Seita.3G215900.1 No alias E-class RAB GTPase 0.04 Orthogroups_2024-Update
Seita.9G034500.1 No alias E-class RAB GTPase 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003924 GTPase activity IEA 16Dec
MF GO:0005525 GTP binding IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0000062 fatty-acyl-CoA binding IEP Predicted GO
MF GO:0004806 triglyceride lipase activity IEP Predicted GO
CC GO:0005681 spliceosomal complex IEP Predicted GO
BP GO:0007034 vacuolar transport IEP Predicted GO
MF GO:0008113 peptide-methionine (S)-S-oxide reductase activity IEP Predicted GO
BP GO:0008380 RNA splicing IEP Predicted GO
MF GO:0016298 lipase activity IEP Predicted GO
MF GO:0016667 oxidoreductase activity, acting on a sulfur group of donors IEP Predicted GO
MF GO:0016671 oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor IEP Predicted GO
MF GO:0031072 heat shock protein binding IEP Predicted GO
MF GO:0033218 amide binding IEP Predicted GO
BP GO:0070647 protein modification by small protein conjugation or removal IEP Predicted GO
MF GO:1901567 fatty acid derivative binding IEP Predicted GO
MF GO:1901681 sulfur compound binding IEP Predicted GO
InterPro domains Description Start Stop
IPR001806 Small_GTPase 37 190
No external refs found!