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  5. At3g46070

At3g46070


Description : C2H2-type zinc finger family protein [Source:UniProtKB/TrEMBL;Acc:Q9LX86]


Gene families : OG_42_0000046 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000046_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Arabidopsis release: At3g46070
Cluster HCCA clusters: Cluster_226

Target Alias Description ECC score Gene Family Method Actions
Brara.C01878.1 No alias C2H2-type subclass ZAT transcription factor 0.04 Orthogroups_2024-Update
Brara.I03003.1 No alias C2H2-type subclass ZAT transcription factor 0.03 Orthogroups_2024-Update
GRMZM2G035103 No alias salt tolerance zinc finger 0.04 Orthogroups_2024-Update
GRMZM2G356556 No alias zinc finger of Arabidopsis thaliana 6 0.03 Orthogroups_2024-Update
Glyma.11G084900 No alias zinc finger (C2H2 type) family protein 0.03 Orthogroups_2024-Update
Glyma.13G146400 No alias C2H2-type zinc finger family protein 0.04 Orthogroups_2024-Update
Glyma.17G236200 No alias salt tolerance zinc finger 0.04 Orthogroups_2024-Update
LOC_Os03g55540 No alias ZOS3-18 - C2H2 zinc finger protein, expressed 0.04 Orthogroups_2024-Update
Potri.002G119300 No alias salt tolerance zinc finger 0.03 Orthogroups_2024-Update
Potri.007G062000 No alias zinc finger (C2H2 type) family protein 0.04 Orthogroups_2024-Update
Potri.010G209400 No alias C2H2 and C2HC zinc fingers superfamily protein 0.03 Orthogroups_2024-Update
Seita.8G248000.1 No alias C2H2-type subclass ZAT transcription factor 0.03 Orthogroups_2024-Update
Sobic.001G330200.1 No alias C2H2-type subclass ZAT transcription factor 0.03 Orthogroups_2024-Update
Sobic.001G333700.1 No alias C2H2-type subclass ZAT transcription factor 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Predicted GO
MF GO:0003678 DNA helicase activity IEP Predicted GO
MF GO:0004003 ATP-dependent DNA helicase activity IEP Predicted GO
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Predicted GO
MF GO:0004888 transmembrane signaling receptor activity IEP Predicted GO
MF GO:0004970 ionotropic glutamate receptor activity IEP Predicted GO
MF GO:0005230 extracellular ligand-gated ion channel activity IEP Predicted GO
CC GO:0005576 extracellular region IEP Predicted GO
CC GO:0005618 cell wall IEP Predicted GO
BP GO:0005976 polysaccharide metabolic process IEP Predicted GO
BP GO:0006073 cellular glucan metabolic process IEP Predicted GO
MF GO:0008026 ATP-dependent helicase activity IEP Predicted GO
MF GO:0008066 glutamate receptor activity IEP Predicted GO
MF GO:0008094 DNA-dependent ATPase activity IEP Predicted GO
MF GO:0008252 nucleotidase activity IEP Predicted GO
MF GO:0008253 5'-nucleotidase activity IEP Predicted GO
MF GO:0015276 ligand-gated ion channel activity IEP Predicted GO
MF GO:0016762 xyloglucan:xyloglucosyl transferase activity IEP Predicted GO
MF GO:0016787 hydrolase activity IEP Predicted GO
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Predicted GO
MF GO:0022824 transmitter-gated ion channel activity IEP Predicted GO
MF GO:0022834 ligand-gated channel activity IEP Predicted GO
MF GO:0022835 transmitter-gated channel activity IEP Predicted GO
CC GO:0030312 external encapsulating structure IEP Predicted GO
MF GO:0030594 neurotransmitter receptor activity IEP Predicted GO
MF GO:0038023 signaling receptor activity IEP Predicted GO
MF GO:0043531 ADP binding IEP Predicted GO
BP GO:0044042 glucan metabolic process IEP Predicted GO
BP GO:0044262 cellular carbohydrate metabolic process IEP Predicted GO
BP GO:0044264 cellular polysaccharide metabolic process IEP Predicted GO
MF GO:0046527 glucosyltransferase activity IEP Predicted GO
CC GO:0048046 apoplast IEP Predicted GO
MF GO:0060089 molecular transducer activity IEP Predicted GO
MF GO:0070035 purine NTP-dependent helicase activity IEP Predicted GO
MF GO:1901265 nucleoside phosphate binding IEP Predicted GO

No InterPro domains available for this sequence

No external refs found!