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  5. Sobic.002G109800.1

Sobic.002G109800.1


Description : acidic chitinase *(CHIA)


Gene families : OG_42_0000663 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000663_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.002G109800.1
Cluster HCAA Clusters: Cluster_126

Target Alias Description ECC score Gene Family Method Actions
A4A49_40427 No alias hevamine-a 0.02 Orthogroups_2024-Update
Glyma.08G299700 No alias chitinase A 0.04 Orthogroups_2024-Update
LOC_Os01g19750 No alias glycosyl hydrolase, putative, expressed 0.03 Orthogroups_2024-Update
Mp2g03650.1 No alias Acidic endochitinase SE2 OS=Beta vulgaris... 0.02 Orthogroups_2024-Update
Potri.002G165700 No alias chitinase A 0.03 Orthogroups_2024-Update
Potri.012G033866 No alias chitinase A 0.03 Orthogroups_2024-Update
Seita.5G389800.1 No alias acidic chitinase *(CHIA) 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source
BP GO:0005975 carbohydrate metabolic process IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0004470 malic enzyme activity IEP Predicted GO
MF GO:0004471 malate dehydrogenase (decarboxylating) (NAD+) activity IEP Predicted GO
MF GO:0008146 sulfotransferase activity IEP Predicted GO
MF GO:0016615 malate dehydrogenase activity IEP Predicted GO
MF GO:0016651 oxidoreductase activity, acting on NAD(P)H IEP Predicted GO
MF GO:0016782 transferase activity, transferring sulfur-containing groups IEP Predicted GO
MF GO:0050664 oxidoreductase activity, acting on NAD(P)H, oxygen as acceptor IEP Predicted GO
MF GO:0051287 NAD binding IEP Predicted GO
InterPro domains Description Start Stop
IPR001223 Glyco_hydro18_cat 29 284
No external refs found!