Sobic.002G109900.1

Description : acidic chitinase *(CHIA)

Gene families : OG_42_0000663 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000663_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Sorghum bicolor: Sobic.002G109900.1
Cluster	HCAA Clusters: Cluster_274

Target	Alias	Description	ECC score	Gene Family Method	Actions
GRMZM5G837822	No alias	chitinase A	0.02	Orthogroups_2024-Update
Mp2g01600.1	No alias	Acidic endochitinase SE2 OS=Beta vulgaris...	0.02	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
BP	GO:0005975	carbohydrate metabolic process	IEA	16Dec
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0004057	arginyltransferase activity	IEP	Predicted GO
MF	GO:0009055	electron transfer activity	IEP	Predicted GO
BP	GO:0016598	protein arginylation	IEP	Predicted GO
MF	GO:0016755	transferase activity, transferring amino-acyl groups	IEP	Predicted GO
MF	GO:0016837	carbon-oxygen lyase activity, acting on polysaccharides	IEP	Predicted GO
MF	GO:0030570	pectate lyase activity	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR001223	Glyco_hydro18_cat	29	284

External Links

No external refs found!