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  5. Sobic.002G113100.1

Sobic.002G113100.1


Description : Unknown function


Gene families : OG_42_0000213 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000213_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.002G113100.1
Cluster HCAA Clusters: Cluster_176

Target Alias Description ECC score Gene Family Method Actions
At1g03700 No alias CASP-like protein 1C2 [Source:UniProtKB/Swiss-Prot;Acc:Q9LR57] 0.03 Orthogroups_2024-Update
At2g27370 No alias Casparian strip membrane protein 3... 0.03 Orthogroups_2024-Update
At2g36100 No alias Casparian strip membrane protein 1... 0.03 Orthogroups_2024-Update
At3g11550 No alias Casparian strip membrane protein 2... 0.02 Orthogroups_2024-Update
At5g06200 No alias CASP-like protein [Source:UniProtKB/TrEMBL;Acc:A0A178UFD9] 0.03 Orthogroups_2024-Update
Bradi1g29070 No alias Uncharacterised protein family (UPF0497) 0.04 Orthogroups_2024-Update
Brara.C04446.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Brara.H01038.1 No alias Unknown function 0.03 Orthogroups_2024-Update
GRMZM5G863076 No alias Uncharacterised protein family (UPF0497) 0.04 Orthogroups_2024-Update
Glyma.17G023000 No alias Uncharacterised protein family (UPF0497) 0.03 Orthogroups_2024-Update
Solyc02g078250 No alias CASP-like protein (AHRD V3.3 *** K4B950_SOLLC) 0.03 Orthogroups_2024-Update
Solyc05g007790 No alias CASP-like protein (AHRD V3.3 *** K4BWV4_SOLLC) 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Predicted GO
MF GO:0001871 pattern binding IEP Predicted GO
MF GO:0003674 molecular_function IEP Predicted GO
MF GO:0003824 catalytic activity IEP Predicted GO
MF GO:0004252 serine-type endopeptidase activity IEP Predicted GO
MF GO:0004672 protein kinase activity IEP Predicted GO
MF GO:0004842 ubiquitin-protein transferase activity IEP Predicted GO
MF GO:0005488 binding IEP Predicted GO
MF GO:0005509 calcium ion binding IEP Predicted GO
MF GO:0005515 protein binding IEP Predicted GO
MF GO:0005524 ATP binding IEP Predicted GO
BP GO:0006464 cellular protein modification process IEP Predicted GO
BP GO:0006468 protein phosphorylation IEP Predicted GO
BP GO:0006793 phosphorus metabolic process IEP Predicted GO
BP GO:0006796 phosphate-containing compound metabolic process IEP Predicted GO
BP GO:0006807 nitrogen compound metabolic process IEP Predicted GO
MF GO:0008144 drug binding IEP Predicted GO
BP GO:0008150 biological_process IEP Predicted GO
BP GO:0008152 metabolic process IEP Predicted GO
BP GO:0009987 cellular process IEP Predicted GO
MF GO:0016301 kinase activity IEP Predicted GO
BP GO:0016310 phosphorylation IEP Predicted GO
BP GO:0016567 protein ubiquitination IEP Predicted GO
MF GO:0016740 transferase activity IEP Predicted GO
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Predicted GO
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Predicted GO
MF GO:0017076 purine nucleotide binding IEP Predicted GO
BP GO:0019538 protein metabolic process IEP Predicted GO
MF GO:0019787 ubiquitin-like protein transferase activity IEP Predicted GO
MF GO:0030246 carbohydrate binding IEP Predicted GO
MF GO:0030247 polysaccharide binding IEP Predicted GO
MF GO:0030554 adenyl nucleotide binding IEP Predicted GO
BP GO:0032446 protein modification by small protein conjugation IEP Predicted GO
MF GO:0032553 ribonucleotide binding IEP Predicted GO
MF GO:0032555 purine ribonucleotide binding IEP Predicted GO
MF GO:0032559 adenyl ribonucleotide binding IEP Predicted GO
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Predicted GO
MF GO:0036094 small molecule binding IEP Predicted GO
BP GO:0036211 protein modification process IEP Predicted GO
MF GO:0043167 ion binding IEP Predicted GO
MF GO:0043168 anion binding IEP Predicted GO
BP GO:0043170 macromolecule metabolic process IEP Predicted GO
BP GO:0043412 macromolecule modification IEP Predicted GO
BP GO:0044237 cellular metabolic process IEP Predicted GO
BP GO:0044238 primary metabolic process IEP Predicted GO
BP GO:0044260 cellular macromolecule metabolic process IEP Predicted GO
BP GO:0044267 cellular protein metabolic process IEP Predicted GO
BP GO:0070647 protein modification by small protein conjugation or removal IEP Predicted GO
BP GO:0071704 organic substance metabolic process IEP Predicted GO
MF GO:0097159 organic cyclic compound binding IEP Predicted GO
MF GO:0097367 carbohydrate derivative binding IEP Predicted GO
MF GO:0140096 catalytic activity, acting on a protein IEP Predicted GO
MF GO:1901265 nucleoside phosphate binding IEP Predicted GO
MF GO:1901363 heterocyclic compound binding IEP Predicted GO
BP GO:1901564 organonitrogen compound metabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR006702 CASP_dom 32 183
No external refs found!