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  5. Sobic.002G114900.1

Sobic.002G114900.1


Description : nucleocytoplasmic export karyopherin *(XPO1) & export karyopherin *(XPO1) of RNA-induced silencing complex (RISC) export


Gene families : OG_42_0003485 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0003485_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.002G114900.1
Cluster HCAA Clusters: Cluster_138

Target Alias Description ECC score Gene Family Method Actions
Pp1s257_34V6 No alias 1 homolog 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005049 nuclear export signal receptor activity IEA 16Dec
BP GO:0006886 intracellular protein transport IEA 16Dec
MF GO:0031267 small GTPase binding IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0004175 endopeptidase activity IEP Predicted GO
MF GO:0004252 serine-type endopeptidase activity IEP Predicted GO
MF GO:0008236 serine-type peptidase activity IEP Predicted GO
MF GO:0017171 serine hydrolase activity IEP Predicted GO
InterPro domains Description Start Stop
IPR001494 Importin-beta_N 37 103
IPR013598 Exportin-1/Importin-b-like 115 258
IPR014877 XPO1_C_dom 706 1025
No external refs found!