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  5. Sobic.002G116000.1

Sobic.002G116000.1


Description : EC_2.4 glycosyltransferase & granule-bound starch (amylose) synthase *(GBSS)


Gene families : OG_42_0004583 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0004583_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood Sorghum bicolor: Sobic.002G116000.1
Cluster HCAA Clusters: Cluster_195

Target Alias Description ECC score Gene Family Method Actions
149847 No alias UDP-Glycosyltransferase superfamily protein 0.04 Orthogroups_2024-Update
A4A49_14386 No alias granule-bound starch synthase 1, chloroplasticamyloplastic 0.06 Orthogroups_2024-Update
At1g32900 No alias Granule-bound starch synthase 1,... 0.07 Orthogroups_2024-Update
Brara.E01764.1 No alias EC_2.4 glycosyltransferase & granule-bound starch... 0.07 Orthogroups_2024-Update
Cre17.g721500 No alias UDP-Glycosyltransferase superfamily protein 0.01 Orthogroups_2024-Update
GRMZM2G008263 No alias UDP-Glycosyltransferase superfamily protein 0.06 Orthogroups_2024-Update
Glyma.07G049900 No alias UDP-Glycosyltransferase superfamily protein 0.07 Orthogroups_2024-Update
Glyma.16G018500 No alias UDP-Glycosyltransferase superfamily protein 0.06 Orthogroups_2024-Update
Kfl00561_0020 kfl00561_0020_v1.1 (o82627|ssg1_antma : 744.0) Granule-bound starch... 0.01 Orthogroups_2024-Update
Mp1g23640.1 No alias granule-bound starch (amylose) synthase 0.03 Orthogroups_2024-Update
PSME_00003120-RA No alias (at1g32900 : 654.0) UDP-Glycosyltransferase superfamily... 0.02 Orthogroups_2024-Update
PSME_00003121-RA No alias (at1g32900 : 675.0) UDP-Glycosyltransferase superfamily... 0.02 Orthogroups_2024-Update
Pp1s33_144V6 No alias granule-bound starch synthase 0.03 Orthogroups_2024-Update
Seita.2G112500.1 No alias EC_2.4 glycosyltransferase & granule-bound starch... 0.07 Orthogroups_2024-Update
Solyc08g083320 No alias granule-bound starch synthase 1 0.06 Orthogroups_2024-Update
Sopen08g031530 No alias Starch synthase catalytic domain 0.06 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0016757 transferase activity, transferring glycosyl groups IEA 16Dec
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Type GO Term Name Evidence Source
BP GO:0000271 polysaccharide biosynthetic process IEP Predicted GO
MF GO:0003729 mRNA binding IEP Predicted GO
MF GO:0004332 fructose-bisphosphate aldolase activity IEP Predicted GO
MF GO:0004497 monooxygenase activity IEP Predicted GO
MF GO:0004619 phosphoglycerate mutase activity IEP Predicted GO
MF GO:0005102 signaling receptor binding IEP Predicted GO
CC GO:0005849 mRNA cleavage factor complex IEP Predicted GO
BP GO:0005975 carbohydrate metabolic process IEP Predicted GO
BP GO:0005976 polysaccharide metabolic process IEP Predicted GO
BP GO:0006006 glucose metabolic process IEP Predicted GO
BP GO:0006007 glucose catabolic process IEP Predicted GO
BP GO:0006073 cellular glucan metabolic process IEP Predicted GO
BP GO:0006378 mRNA polyadenylation IEP Predicted GO
BP GO:0007165 signal transduction IEP Predicted GO
MF GO:0008083 growth factor activity IEP Predicted GO
MF GO:0008194 UDP-glycosyltransferase activity IEP Predicted GO
BP GO:0008283 cell proliferation IEP Predicted GO
BP GO:0009056 catabolic process IEP Predicted GO
BP GO:0009250 glucan biosynthetic process IEP Predicted GO
BP GO:0009690 cytokinin metabolic process IEP Predicted GO
BP GO:0010817 regulation of hormone levels IEP Predicted GO
MF GO:0015035 protein disulfide oxidoreductase activity IEP Predicted GO
MF GO:0015036 disulfide oxidoreductase activity IEP Predicted GO
CC GO:0016020 membrane IEP Predicted GO
BP GO:0016051 carbohydrate biosynthetic process IEP Predicted GO
BP GO:0016052 carbohydrate catabolic process IEP Predicted GO
MF GO:0016759 cellulose synthase activity IEP Predicted GO
MF GO:0016760 cellulose synthase (UDP-forming) activity IEP Predicted GO
MF GO:0016830 carbon-carbon lyase activity IEP Predicted GO
MF GO:0016832 aldehyde-lyase activity IEP Predicted GO
MF GO:0016868 intramolecular transferase activity, phosphotransferases IEP Predicted GO
MF GO:0019139 cytokinin dehydrogenase activity IEP Predicted GO
BP GO:0019320 hexose catabolic process IEP Predicted GO
MF GO:0030145 manganese ion binding IEP Predicted GO
BP GO:0030163 protein catabolic process IEP Predicted GO
BP GO:0030243 cellulose metabolic process IEP Predicted GO
BP GO:0030244 cellulose biosynthetic process IEP Predicted GO
MF GO:0030545 receptor regulator activity IEP Predicted GO
BP GO:0031123 RNA 3'-end processing IEP Predicted GO
BP GO:0031124 mRNA 3'-end processing IEP Predicted GO
BP GO:0033692 cellular polysaccharide biosynthetic process IEP Predicted GO
BP GO:0034637 cellular carbohydrate biosynthetic process IEP Predicted GO
BP GO:0034754 cellular hormone metabolic process IEP Predicted GO
MF GO:0035251 UDP-glucosyltransferase activity IEP Predicted GO
BP GO:0042445 hormone metabolic process IEP Predicted GO
BP GO:0043631 RNA polyadenylation IEP Predicted GO
BP GO:0043647 inositol phosphate metabolic process IEP Predicted GO
BP GO:0044042 glucan metabolic process IEP Predicted GO
BP GO:0044262 cellular carbohydrate metabolic process IEP Predicted GO
BP GO:0044264 cellular polysaccharide metabolic process IEP Predicted GO
BP GO:0044282 small molecule catabolic process IEP Predicted GO
BP GO:0046164 alcohol catabolic process IEP Predicted GO
BP GO:0046174 polyol catabolic process IEP Predicted GO
BP GO:0046365 monosaccharide catabolic process IEP Predicted GO
BP GO:0046434 organophosphate catabolic process IEP Predicted GO
MF GO:0046527 glucosyltransferase activity IEP Predicted GO
BP GO:0046838 phosphorylated carbohydrate dephosphorylation IEP Predicted GO
BP GO:0046855 inositol phosphate dephosphorylation IEP Predicted GO
MF GO:0048018 receptor ligand activity IEP Predicted GO
BP GO:0051273 beta-glucan metabolic process IEP Predicted GO
BP GO:0051274 beta-glucan biosynthetic process IEP Predicted GO
BP GO:0055085 transmembrane transport IEP Predicted GO
BP GO:0071545 inositol phosphate catabolic process IEP Predicted GO
BP GO:1901575 organic substance catabolic process IEP Predicted GO
BP GO:1901616 organic hydroxy compound catabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR001296 Glyco_trans_1 399 521
IPR013534 Starch_synth_cat_dom 83 341
No external refs found!