Description : component *(NRP-ABCDE6) of RNA polymerase complexes
Gene families : OG_42_0004552 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0004552_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | Sorghum bicolor: Sobic.002G129200.1 | |
Cluster | HCAA Clusters: Cluster_175 |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003677 | DNA binding | IEA | 16Dec |
MF | GO:0003899 | DNA-directed 5'-3' RNA polymerase activity | IEA | 16Dec |
BP | GO:0006351 | transcription, DNA-templated | IEA | 16Dec |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0000375 | RNA splicing, via transesterification reactions | IEP | Predicted GO |
BP | GO:0000377 | RNA splicing, via transesterification reactions with bulged adenosine as nucleophile | IEP | Predicted GO |
BP | GO:0000398 | mRNA splicing, via spliceosome | IEP | Predicted GO |
MF | GO:0003697 | single-stranded DNA binding | IEP | Predicted GO |
CC | GO:0005740 | mitochondrial envelope | IEP | Predicted GO |
CC | GO:0005751 | mitochondrial respiratory chain complex IV | IEP | Predicted GO |
BP | GO:0006123 | mitochondrial electron transport, cytochrome c to oxygen | IEP | Predicted GO |
BP | GO:0006397 | mRNA processing | IEP | Predicted GO |
BP | GO:0008380 | RNA splicing | IEP | Predicted GO |
BP | GO:0009060 | aerobic respiration | IEP | Predicted GO |
BP | GO:0015980 | energy derivation by oxidation of organic compounds | IEP | Predicted GO |
BP | GO:0016071 | mRNA metabolic process | IEP | Predicted GO |
MF | GO:0016799 | hydrolase activity, hydrolyzing N-glycosyl compounds | IEP | Predicted GO |
BP | GO:0018142 | protein-DNA covalent cross-linking | IEP | Predicted GO |
BP | GO:0018143 | nucleic acid-protein covalent cross-linking | IEP | Predicted GO |
BP | GO:0019646 | aerobic electron transport chain | IEP | Predicted GO |
BP | GO:0022900 | electron transport chain | IEP | Predicted GO |
BP | GO:0022904 | respiratory electron transport chain | IEP | Predicted GO |
CC | GO:0030532 | small nuclear ribonucleoprotein complex | IEP | Predicted GO |
CC | GO:0031967 | organelle envelope | IEP | Predicted GO |
CC | GO:0031975 | envelope | IEP | Predicted GO |
CC | GO:0044422 | organelle part | IEP | Predicted GO |
CC | GO:0044429 | mitochondrial part | IEP | Predicted GO |
CC | GO:0044446 | intracellular organelle part | IEP | Predicted GO |
CC | GO:0044455 | mitochondrial membrane part | IEP | Predicted GO |
CC | GO:0045277 | respiratory chain complex IV | IEP | Predicted GO |
BP | GO:0045333 | cellular respiration | IEP | Predicted GO |
CC | GO:0046540 | U4/U6 x U5 tri-snRNP complex | IEP | Predicted GO |
BP | GO:0055114 | oxidation-reduction process | IEP | Predicted GO |
CC | GO:0070069 | cytochrome complex | IEP | Predicted GO |
CC | GO:0097525 | spliceosomal snRNP complex | IEP | Predicted GO |
CC | GO:0097526 | spliceosomal tri-snRNP complex | IEP | Predicted GO |
CC | GO:0098798 | mitochondrial protein complex | IEP | Predicted GO |
CC | GO:0098800 | inner mitochondrial membrane protein complex | IEP | Predicted GO |
CC | GO:0098803 | respiratory chain complex | IEP | Predicted GO |
CC | GO:0120114 | Sm-like protein family complex | IEP | Predicted GO |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR006110 | Pol_omega/K/RPB6 | 60 | 111 |
No external refs found! |