Sobic.002G138800.1

Description : peptidyl-prolyl cis-trans isomerase *(ROC1/2/3) & EC_5.2 cis-trans-isomerase

Gene families : OG_42_0000307 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000307_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Sorghum bicolor: Sobic.002G138800.1
Cluster	HCAA Clusters: Cluster_164

Target	Alias	Description	ECC score	Gene Family Method
A4A49_27145	No alias	peptidyl-prolyl cis-trans isomerase cyp19-3	0.04	Orthogroups_2024-Update
At3g56070	No alias	Peptidyl-prolyl cis-trans isomerase CYP19-3...	0.04	Orthogroups_2024-Update
Glyma.12G024700	No alias	rotamase CYP 3	0.04	Orthogroups_2024-Update
Glyma.19G222600	No alias	rotamase CYP 4	0.03	Orthogroups_2024-Update
LOC_Os09g39780	No alias	peptidyl-prolyl cis-trans isomerase, putative, expressed	0.04	Orthogroups_2024-Update
MA_913013g0020	No alias	(q39613\|cyph_catro : 267.0) Peptidyl-prolyl cis-trans...	0.03	Orthogroups_2024-Update
Potri.005G240200	No alias	rotamase CYP 3	0.03	Orthogroups_2024-Update
Potri.T051300	No alias	rotamase cyclophilin 2	0.02	Orthogroups_2024-Update
Pp1s196_68V6	No alias	peptidyl-prolyl cis-trans isomerase	0.02	Orthogroups_2024-Update
Seita.2G137800.1	No alias	peptidyl-prolyl cis-trans isomerase *(ROC1/2/3) & EC_5.2...	0.12	Orthogroups_2024-Update
Solyc08g067090	No alias	cyclophilin-like protein	0.04	Orthogroups_2024-Update
Solyc11g006070	No alias	Peptidyl-prolyl cis-trans isomerase (AHRD V3.3 *** M1CSR8_SOLTU)	0.03	Orthogroups_2024-Update
Sopen11g002010	No alias	Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD	0.03	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
BP	GO:0000413	protein peptidyl-prolyl isomerization	IEA	16Dec
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003755	peptidyl-prolyl cis-trans isomerase activity	IEA	16Dec
MF	GO:0003824	catalytic activity	None	Extended
BP	GO:0006464	cellular protein modification process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
MF	GO:0016853	isomerase activity	None	Extended
MF	GO:0016859	cis-trans isomerase activity	None	Extended
BP	GO:0018193	peptidyl-amino acid modification	None	Extended
BP	GO:0018208	peptidyl-proline modification	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
BP	GO:0036211	protein modification process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0043412	macromolecule modification	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044267	cellular protein metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
MF	GO:0140096	catalytic activity, acting on a protein	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0001522	pseudouridine synthesis	IEP	Predicted GO
MF	GO:0003676	nucleic acid binding	IEP	Predicted GO
MF	GO:0003723	RNA binding	IEP	Predicted GO
MF	GO:0004014	adenosylmethionine decarboxylase activity	IEP	Predicted GO
CC	GO:0005730	nucleolus	IEP	Predicted GO
BP	GO:0006139	nucleobase-containing compound metabolic process	IEP	Predicted GO
BP	GO:0006396	RNA processing	IEP	Predicted GO
BP	GO:0006576	cellular biogenic amine metabolic process	IEP	Predicted GO
BP	GO:0006595	polyamine metabolic process	IEP	Predicted GO
BP	GO:0006596	polyamine biosynthetic process	IEP	Predicted GO
BP	GO:0006597	spermine biosynthetic process	IEP	Predicted GO
BP	GO:0006725	cellular aromatic compound metabolic process	IEP	Predicted GO
BP	GO:0008215	spermine metabolic process	IEP	Predicted GO
BP	GO:0008216	spermidine metabolic process	IEP	Predicted GO
BP	GO:0008295	spermidine biosynthetic process	IEP	Predicted GO
BP	GO:0009308	amine metabolic process	IEP	Predicted GO
BP	GO:0009309	amine biosynthetic process	IEP	Predicted GO
BP	GO:0016070	RNA metabolic process	IEP	Predicted GO
MF	GO:0016831	carboxy-lyase activity	IEP	Predicted GO
MF	GO:0019843	rRNA binding	IEP	Predicted GO
BP	GO:0022613	ribonucleoprotein complex biogenesis	IEP	Predicted GO
BP	GO:0034641	cellular nitrogen compound metabolic process	IEP	Predicted GO
BP	GO:0042254	ribosome biogenesis	IEP	Predicted GO
BP	GO:0042401	cellular biogenic amine biosynthetic process	IEP	Predicted GO
CC	GO:0043226	organelle	IEP	Predicted GO
CC	GO:0043228	non-membrane-bounded organelle	IEP	Predicted GO
CC	GO:0043229	intracellular organelle	IEP	Predicted GO
CC	GO:0043232	intracellular non-membrane-bounded organelle	IEP	Predicted GO
BP	GO:0044085	cellular component biogenesis	IEP	Predicted GO
BP	GO:0044106	cellular amine metabolic process	IEP	Predicted GO
BP	GO:0046483	heterocycle metabolic process	IEP	Predicted GO
BP	GO:0090304	nucleic acid metabolic process	IEP	Predicted GO
BP	GO:0097164	ammonium ion metabolic process	IEP	Predicted GO
BP	GO:1901360	organic cyclic compound metabolic process	IEP	Predicted GO
BP	GO:1901566	organonitrogen compound biosynthetic process	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR002130	Cyclophilin-type_PPIase_dom	15	170

External Links

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Sobic.002G138800.1

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation