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At3g46460


Description : UBC13 [Source:UniProtKB/TrEMBL;Acc:A0A178V960]


Gene families : OG_42_0002092 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0002092_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Arabidopsis release: At3g46460
Cluster HCCA clusters: Cluster_66

Target Alias Description ECC score Gene Family Method Actions
Mp4g07670.1 No alias component Ubc13 of Ubc13-Uev1 conjugating E2 complex. E2... 0.02 Orthogroups_2024-Update
PSME_00009309-RA No alias (at3g46460 : 234.0) ubiquitin-conjugating enzyme 13... 0.04 Orthogroups_2024-Update
Seita.5G375700.1 No alias E2 ubiquitin-conjugating component *(Ubc7/13/14) of HRD1... 0.02 Orthogroups_2024-Update
Sopen05g033030 No alias Ubiquitin-conjugating enzyme 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0008131 primary amine oxidase activity IEP Predicted GO
MF GO:0008430 selenium binding IEP Predicted GO
BP GO:0009058 biosynthetic process IEP Predicted GO
BP GO:0009059 macromolecule biosynthetic process IEP Predicted GO
CC GO:0009654 photosystem II oxygen evolving complex IEP Predicted GO
BP GO:0010109 regulation of photosynthesis IEP Predicted GO
BP GO:0010207 photosystem II assembly IEP Predicted GO
MF GO:0010242 oxygen evolving activity IEP Predicted GO
MF GO:0016638 oxidoreductase activity, acting on the CH-NH2 group of donors IEP Predicted GO
MF GO:0016641 oxidoreductase activity, acting on the CH-NH2 group of donors, oxygen as acceptor IEP Predicted GO
MF GO:0016779 nucleotidyltransferase activity IEP Predicted GO
MF GO:0030145 manganese ion binding IEP Predicted GO
BP GO:0034645 cellular macromolecule biosynthetic process IEP Predicted GO
BP GO:0042548 regulation of photosynthesis, light reaction IEP Predicted GO
BP GO:0042549 photosystem II stabilization IEP Predicted GO
BP GO:0043467 regulation of generation of precursor metabolites and energy IEP Predicted GO
CC GO:0044436 thylakoid part IEP Predicted GO
MF GO:0048038 quinone binding IEP Predicted GO
BP GO:1901576 organic substance biosynthetic process IEP Predicted GO
InterPro domains Description Start Stop
IPR000608 UBQ-conjugat_E2 9 158
No external refs found!