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At3g46520


Description : Actin-12 [Source:UniProtKB/Swiss-Prot;Acc:P53497]


Gene families : OG_42_0000262 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000262_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Arabidopsis release: At3g46520
Cluster HCCA clusters: Cluster_145

Target Alias Description ECC score Gene Family Method Actions
A4A49_65510 No alias actin-71 0.03 Orthogroups_2024-Update
LOC_Os10g36650 No alias actin, putative, expressed 0.03 Orthogroups_2024-Update
MA_9015982g0010 No alias (p13362|act1_orysa : 582.0) Actin-1 - Oryza sativa... 0.04 Orthogroups_2024-Update
Mp6g11010.1 No alias actin filament protein 0.02 Orthogroups_2024-Update
PSME_00011258-RA No alias (o81221|act_goshi : 662.0) Actin - Gossypium hirsutum... 0.03 Orthogroups_2024-Update
PSME_00045427-RA No alias (o81221|act_goshi : 556.0) Actin - Gossypium hirsutum... 0.03 Orthogroups_2024-Update
PSME_00051304-RA No alias (at5g09810 : 651.0) Member of Actin gene family.Mutants... 0.03 Orthogroups_2024-Update
Solyc01g104770 No alias transcription factor (AHRD V3.3 *** AT1G76870.3) 0.04 Orthogroups_2024-Update
Sopen03g021220 No alias Actin 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000105 histidine biosynthetic process IEP Predicted GO
MF GO:0003879 ATP phosphoribosyltransferase activity IEP Predicted GO
MF GO:0005534 galactose binding IEP Predicted GO
CC GO:0005875 microtubule associated complex IEP Predicted GO
BP GO:0006547 histidine metabolic process IEP Predicted GO
BP GO:0009073 aromatic amino acid family biosynthetic process IEP Predicted GO
MF GO:0016757 transferase activity, transferring glycosyl groups IEP Predicted GO
MF GO:0016763 transferase activity, transferring pentosyl groups IEP Predicted GO
MF GO:0030246 carbohydrate binding IEP Predicted GO
CC GO:0030286 dynein complex IEP Predicted GO
MF GO:0048029 monosaccharide binding IEP Predicted GO
BP GO:0052803 imidazole-containing compound metabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR004000 Actin 5 377
No external refs found!