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  5. Sobic.002G149200.1

Sobic.002G149200.1


Description : Unknown function


Gene families : OG_42_0000570 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000570_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.002G149200.1
Cluster HCAA Clusters: Cluster_39

Target Alias Description ECC score Gene Family Method Actions
Bradi3g16060 No alias Ankyrin repeat family protein 0.03 Orthogroups_2024-Update
HORVU7Hr1G043810.8 No alias Unknown function 0.02 Orthogroups_2024-Update
LOC_Os06g18960 No alias embryogenesis transmembrane protein, putative, expressed 0.03 Orthogroups_2024-Update
LOC_Os06g19260 No alias cadmium tolerance factor, putative, expressed 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004601 peroxidase activity IEP Predicted GO
BP GO:0006950 response to stress IEP Predicted GO
BP GO:0006979 response to oxidative stress IEP Predicted GO
MF GO:0008171 O-methyltransferase activity IEP Predicted GO
MF GO:0016209 antioxidant activity IEP Predicted GO
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP Predicted GO
MF GO:0016840 carbon-nitrogen lyase activity IEP Predicted GO
MF GO:0016843 amine-lyase activity IEP Predicted GO
MF GO:0016844 strictosidine synthase activity IEP Predicted GO
InterPro domains Description Start Stop
IPR026961 PGG_dom 183 300
IPR026961 PGG_dom 375 478
IPR026961 PGG_dom 25 132
IPR026961 PGG_dom 516 631
IPR026961 PGG_dom 704 734
No external refs found!