1. Home
  2. Species
  3. Arabidopsis thaliana
  4. Sequence
  5. At3g46590

At3g46590


Description : Telomere repeat-binding protein 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9SNB9]


Gene families : OG_42_0001495 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001495_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Arabidopsis release: At3g46590
Cluster HCCA clusters: Cluster_88

Target Alias Description ECC score Gene Family Method Actions
121021 No alias TRF-like 2 0.02 Orthogroups_2024-Update
Brara.J01319.1 No alias telomeric dsDNA-binding protein 0.03 Orthogroups_2024-Update
GRMZM2G110309 No alias TRF-like 2 0.03 Orthogroups_2024-Update
HORVU4Hr1G059800.2 No alias telomeric dsDNA-binding protein 0.02 Orthogroups_2024-Update
Potri.006G086500 No alias TRF-like 2 0.03 Orthogroups_2024-Update
Seita.9G453400.1 No alias telomeric dsDNA-binding protein 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003690 double-stranded DNA binding IEP Predicted GO
MF GO:0004129 cytochrome-c oxidase activity IEP Predicted GO
MF GO:0004357 glutamate-cysteine ligase activity IEP Predicted GO
MF GO:0004525 ribonuclease III activity IEP Predicted GO
CC GO:0005740 mitochondrial envelope IEP Predicted GO
BP GO:0006298 mismatch repair IEP Predicted GO
BP GO:0006665 sphingolipid metabolic process IEP Predicted GO
BP GO:0006672 ceramide metabolic process IEP Predicted GO
MF GO:0008289 lipid binding IEP Predicted GO
BP GO:0009309 amine biosynthetic process IEP Predicted GO
MF GO:0015002 heme-copper terminal oxidase activity IEP Predicted GO
MF GO:0016675 oxidoreductase activity, acting on a heme group of donors IEP Predicted GO
MF GO:0016676 oxidoreductase activity, acting on a heme group of donors, oxygen as acceptor IEP Predicted GO
MF GO:0016811 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides IEP Predicted GO
MF GO:0016881 acid-amino acid ligase activity IEP Predicted GO
MF GO:0030410 nicotianamine synthase activity IEP Predicted GO
BP GO:0030417 nicotianamine metabolic process IEP Predicted GO
BP GO:0030418 nicotianamine biosynthetic process IEP Predicted GO
MF GO:0030554 adenyl nucleotide binding IEP Predicted GO
MF GO:0030983 mismatched DNA binding IEP Predicted GO
CC GO:0031967 organelle envelope IEP Predicted GO
CC GO:0031975 envelope IEP Predicted GO
MF GO:0032182 ubiquitin-like protein binding IEP Predicted GO
MF GO:0032266 phosphatidylinositol-3-phosphate binding IEP Predicted GO
MF GO:0032296 double-stranded RNA-specific ribonuclease activity IEP Predicted GO
MF GO:0032559 adenyl ribonucleotide binding IEP Predicted GO
MF GO:0035091 phosphatidylinositol binding IEP Predicted GO
BP GO:0042398 cellular modified amino acid biosynthetic process IEP Predicted GO
BP GO:0042401 cellular biogenic amine biosynthetic process IEP Predicted GO
MF GO:0043130 ubiquitin binding IEP Predicted GO
MF GO:0043168 anion binding IEP Predicted GO
MF GO:0070569 uridylyltransferase activity IEP Predicted GO
BP GO:0072350 tricarboxylic acid metabolic process IEP Predicted GO
BP GO:0072351 tricarboxylic acid biosynthetic process IEP Predicted GO
MF GO:1901981 phosphatidylinositol phosphate binding IEP Predicted GO

No InterPro domains available for this sequence

No external refs found!