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  5. Sobic.002G161400.1

Sobic.002G161400.1


Description : Unknown function


Gene families : OG_42_0002551 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0002551_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.002G161400.1
Cluster HCAA Clusters: Cluster_192

Target Alias Description ECC score Gene Family Method Actions
At5g35970 No alias P-loop containing nucleoside triphosphate hydrolases... 0.03 Orthogroups_2024-Update
Bradi3g52690 No alias P-loop containing nucleoside triphosphate hydrolases... 0.06 Orthogroups_2024-Update toggle="tooltip" data-placement="top" title="View cluster as graph">
GRMZM2G128434 No alias P-loop containing nucleoside triphosphate hydrolases... 0.06 Orthogroups_2024-Update
Glyma.02G001000 No alias P-loop containing nucleoside triphosphate hydrolases... 0.03 Orthogroups_2024-Update
HORVU0Hr1G016860.3 No alias Unknown function 0.03 Orthogroups_2024-Update
LOC_Os09g04440 No alias DNA-binding protein, putative, expressed 0.03 Orthogroups_2024-Update
Mp3g22970.1 No alias Regulator of nonsense transcripts 1 homolog... 0.02 Orthogroups_2024-Update
Seita.1G288500.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Solyc03g097370 No alias DNA-binding SMUBP-2 (AHRD V3.3 *** A0A0B0N417_GOSAR) 0.06 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0004386 helicase activity IEA 16Dec
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Type GO Term Name Evidence Source
BP GO:0000096 sulfur amino acid metabolic process IEP Predicted GO
BP GO:0000097 sulfur amino acid biosynthetic process IEP Predicted GO
BP GO:0000272 polysaccharide catabolic process IEP Predicted GO
MF GO:0004096 catalase activity IEP Predicted GO
MF GO:0005215 transporter activity IEP Predicted GO
MF GO:0005319 lipid transporter activity IEP Predicted GO
MF GO:0005548 phospholipid transporter activity IEP Predicted GO
BP GO:0006534 cysteine metabolic process IEP Predicted GO
BP GO:0006535 cysteine biosynthetic process from serine IEP Predicted GO
BP GO:0006563 L-serine metabolic process IEP Predicted GO
BP GO:0006790 sulfur compound metabolic process IEP Predicted GO
BP GO:0006810 transport IEP Predicted GO
BP GO:0006869 lipid transport IEP Predicted GO
MF GO:0009001 serine O-acetyltransferase activity IEP Predicted GO
BP GO:0009069 serine family amino acid metabolic process IEP Predicted GO
BP GO:0009070 serine family amino acid biosynthetic process IEP Predicted GO
BP GO:0015748 organophosphate ester transport IEP Predicted GO
BP GO:0015914 phospholipid transport IEP Predicted GO
BP GO:0016052 carbohydrate catabolic process IEP Predicted GO
BP GO:0016053 organic acid biosynthetic process IEP Predicted GO
MF GO:0016161 beta-amylase activity IEP Predicted GO
BP GO:0016226 iron-sulfur cluster assembly IEP Predicted GO
MF GO:0016407 acetyltransferase activity IEP Predicted GO
MF GO:0016412 serine O-acyltransferase activity IEP Predicted GO
MF GO:0016413 O-acetyltransferase activity IEP Predicted GO
BP GO:0019344 cysteine biosynthetic process IEP Predicted GO
BP GO:0022607 cellular component assembly IEP Predicted GO
BP GO:0031163 metallo-sulfur cluster assembly IEP Predicted GO
MF GO:0044183 protein binding involved in protein folding IEP Predicted GO
BP GO:0044283 small molecule biosynthetic process IEP Predicted GO
BP GO:0046394 carboxylic acid biosynthetic process IEP Predicted GO
BP GO:0051234 establishment of localization IEP Predicted GO
BP GO:0072330 monocarboxylic acid biosynthetic process IEP Predicted GO
BP GO:0110102 chloroplast ribulose bisphosphate carboxylase complex assembly IEP Predicted GO

No InterPro domains available for this sequence

No external refs found!