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Description : component *(MED25) of MEDIATOR transcription co-activator complex
Gene families : OG_42_0003898 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0003898_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Sorghum bicolor: Sobic.002G164200.1 | |
| Cluster | HCAA Clusters: Cluster_234 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| 440592 | No alias | phytochrome and flowering time regulatory protein (PFT1) | 0.02 | Orthogroups_2024-Update | |
| Bradi4g27747 | No alias | phytochrome and flowering time regulatory protein (PFT1) | 0.05 | Orthogroups_2024-Update | |
| Cre17.g736950 | No alias | phytochrome and flowering time regulatory protein (PFT1) | 0.03 | Orthogroups_2024-Update | |
| Glyma.02G098300 | No alias | phytochrome and flowering time regulatory protein (PFT1) | 0.04 | Orthogroups_2024-Update | |
| Pp1s233_16V6 | No alias | pft1 (phytochrome and flowering time 1) transcription coactivator | 0.04 | Orthogroups_2024-Update |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| CC | GO:0000148 | 1,3-beta-D-glucan synthase complex | IEP | Predicted GO |
| MF | GO:0003843 | 1,3-beta-D-glucan synthase activity | IEP | Predicted GO |
| MF | GO:0004842 | ubiquitin-protein transferase activity | IEP | Predicted GO |
| CC | GO:0005694 | chromosome | IEP | Predicted GO |
| BP | GO:0006074 | (1->3)-beta-D-glucan metabolic process | IEP | Predicted GO |
| BP | GO:0006075 | (1->3)-beta-D-glucan biosynthetic process | IEP | Predicted GO |
| BP | GO:0006476 | protein deacetylation | IEP | Predicted GO |
| BP | GO:0016192 | vesicle-mediated transport | IEP | Predicted GO |
| MF | GO:0016409 | palmitoyltransferase activity | IEP | Predicted GO |
| BP | GO:0016569 | covalent chromatin modification | IEP | Predicted GO |
| BP | GO:0016570 | histone modification | IEP | Predicted GO |
| BP | GO:0016575 | histone deacetylation | IEP | Predicted GO |
| MF | GO:0019787 | ubiquitin-like protein transferase activity | IEP | Predicted GO |
| CC | GO:0030118 | clathrin coat | IEP | Predicted GO |
| CC | GO:0030120 | vesicle coat | IEP | Predicted GO |
| CC | GO:0030125 | clathrin vesicle coat | IEP | Predicted GO |
| CC | GO:0030130 | clathrin coat of trans-Golgi network vesicle | IEP | Predicted GO |
| CC | GO:0030132 | clathrin coat of coated pit | IEP | Predicted GO |
| CC | GO:0032991 | protein-containing complex | IEP | Predicted GO |
| BP | GO:0035601 | protein deacylation | IEP | Predicted GO |
| CC | GO:0044424 | intracellular part | IEP | Predicted GO |
| CC | GO:0044425 | membrane part | IEP | Predicted GO |
| CC | GO:0044431 | Golgi apparatus part | IEP | Predicted GO |
| CC | GO:0044433 | cytoplasmic vesicle part | IEP | Predicted GO |
| CC | GO:0044459 | plasma membrane part | IEP | Predicted GO |
| CC | GO:0044464 | cell part | IEP | Predicted GO |
| CC | GO:0072546 | ER membrane protein complex | IEP | Predicted GO |
| BP | GO:0098732 | macromolecule deacylation | IEP | Predicted GO |
| CC | GO:0098796 | membrane protein complex | IEP | Predicted GO |
| CC | GO:0098797 | plasma membrane protein complex | IEP | Predicted GO |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR021419 | Mediator_Med25_VWA | 5 | 228 |
| No external refs found! |