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  5. Sobic.002G172401.1

Sobic.002G172401.1


Description : A-class RAB GTPase


Gene families : OG_42_0000131 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000131_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.002G172401.1
Cluster HCAA Clusters: Cluster_60

Target Alias Description ECC score Gene Family Method Actions
GRMZM2G127648 No alias RAB GTPase homolog A1B 0.03 Orthogroups_2024-Update
Glyma.12G212400 No alias Ras-related small GTP-binding family protein 0.07 Orthogroups_2024-Update
Glyma.19G258000 No alias RAB GTPase homolog A3 0.03 Orthogroups_2024-Update
MA_15386g0010 No alias (at5g60860 : 357.0) RAB GTPase homolog A1F (RABA1f);... 0.02 Orthogroups_2024-Update
Seita.3G292700.1 No alias A-class RAB GTPase 0.04 Orthogroups_2024-Update
Sobic.009G003800.1 No alias A-class RAB GTPase 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003924 GTPase activity IEA 16Dec
MF GO:0005525 GTP binding IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0008289 lipid binding IEP Predicted GO
MF GO:0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor IEP Predicted GO
MF GO:0016903 oxidoreductase activity, acting on the aldehyde or oxo group of donors IEP Predicted GO
MF GO:0051287 NAD binding IEP Predicted GO
InterPro domains Description Start Stop
IPR001806 Small_GTPase 14 174
No external refs found!