1. Home
  2. Species
  3. Arabidopsis thaliana
  4. Sequence
  5. At3g46780

At3g46780


Description : Protein plastid transcriptionally active 16, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9STF2]


Gene families : OG_42_0008396 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0008396_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Arabidopsis release: At3g46780
Cluster HCCA clusters: Cluster_159

Target Alias Description ECC score Gene Family Method Actions
Brara.A02435.1 No alias cofactor of plastid-encoded RNA polymerase *(TAC16) 0.06 Orthogroups_2024-Update
Glyma.11G135900 No alias plastid transcriptionally active 16 0.04 Orthogroups_2024-Update
Kfl00302_0070 kfl00302_0070_v1.1 (at3g46780 : 160.0) plastid transcriptionally active 16... 0.06 Orthogroups_2024-Update
Mp8g16460.1 No alias TAC16 cofactor of plastid-encoded RNA polymerase 0.03 Orthogroups_2024-Update
Pp1s230_36V6 No alias pyridine nucleotide binding protein 0.04 Orthogroups_2024-Update
Sobic.009G091800.2 No alias cofactor of plastid-encoded RNA polymerase *(TAC16) 0.03 Orthogroups_2024-Update
Sobic.009G091850.1 No alias Unknown function 0.05 Orthogroups_2024-Update
Solyc06g005710 No alias Protein plastid transcriptionally active 16,... 0.06 Orthogroups_2024-Update
Sopen06g001690 No alias NADH(P)-binding 0.05 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004853 uroporphyrinogen decarboxylase activity IEP Predicted GO
BP GO:0006308 DNA catabolic process IEP Predicted GO
BP GO:0006778 porphyrin-containing compound metabolic process IEP Predicted GO
BP GO:0006779 porphyrin-containing compound biosynthetic process IEP Predicted GO
CC GO:0009521 photosystem IEP Predicted GO
CC GO:0009522 photosystem I IEP Predicted GO
CC GO:0009538 photosystem I reaction center IEP Predicted GO
CC GO:0009654 photosystem II oxygen evolving complex IEP Predicted GO
BP GO:0015979 photosynthesis IEP Predicted GO
MF GO:0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor IEP Predicted GO
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Predicted GO
MF GO:0016903 oxidoreductase activity, acting on the aldehyde or oxo group of donors IEP Predicted GO
CC GO:0019898 extrinsic component of membrane IEP Predicted GO
BP GO:0033013 tetrapyrrole metabolic process IEP Predicted GO
BP GO:0033014 tetrapyrrole biosynthetic process IEP Predicted GO
CC GO:0044436 thylakoid part IEP Predicted GO
MF GO:0070569 uridylyltransferase activity IEP Predicted GO
CC GO:0098796 membrane protein complex IEP Predicted GO
InterPro domains Description Start Stop
IPR016040 NAD(P)-bd_dom 98 310
No external refs found!