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  5. Sobic.002G178800.2

Sobic.002G178800.2


Description : component *(eL40) of large ribosomal-subunit (LSU) proteome


Gene families : OG_42_0000048 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000048_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.002G178800.2
Cluster HCAA Clusters: Cluster_296

Target Alias Description ECC score Gene Family Method Actions
Brara.C02747.1 No alias UBQ ubiquitin-fold protein 0.02 Orthogroups_2024-Update
Brara.I02133.1 No alias UBQ ubiquitin-fold protein 0.02 Orthogroups_2024-Update
Kfl00272_g6 kfl00272_g6_v1.1 (at4g05320 : 751.0) One of five polyubiquitin genes in... 0.02 Orthogroups_2024-Update
MA_10000516g0010 No alias (at2g47110 : 160.0) polyubiquitin gene; ubiquitin 6... 0.03 Orthogroups_2024-Update
Pp1s127_93V6 No alias polyubiquitin 2 0.02 Orthogroups_2024-Update
Seita.3G398300.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Seita.5G081000.1 No alias UBQ ubiquitin-fold protein 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA 16Dec
MF GO:0005515 protein binding IEA 16Dec
CC GO:0005840 ribosome IEA 16Dec
BP GO:0006412 translation IEA 16Dec
Toggle parental
Type GO Term Name Evidence Source
CC GO:0030126 COPI vesicle coat IEP Predicted GO
InterPro domains Description Start Stop
IPR001975 Ribosomal_L40e 86 128
IPR000626 Ubiquitin_dom 3 74
No external refs found!