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  5. Sobic.002G183400.1

Sobic.002G183400.1


Description : Unknown function


Gene families : OG_42_0000041 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000041_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.002G183400.1
Cluster HCAA Clusters: Cluster_204

Target Alias Description ECC score Gene Family Method Actions
A4A49_07763 No alias heavy metal-associated isoprenylated plant protein 26 0.05 Orthogroups_2024-Update
A4A49_11885 No alias hypothetical protein 0.02 Orthogroups_2024-Update
Brara.C03143.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Glyma.08G139200 No alias Heavy metal transport/detoxification superfamily protein 0.03 Orthogroups_2024-Update
LOC_Os08g10480 No alias heavy metal-associated domain containing protein, expressed 0.02 Orthogroups_2024-Update
MA_131067g0010 No alias (at2g28660 : 104.0) Chloroplast-targeted copper... 0.02 Orthogroups_2024-Update
Potri.004G175400 No alias farnesylated protein 6 0.04 Orthogroups_2024-Update
Pp1s177_46V6 No alias copper chaperone 0.03 Orthogroups_2024-Update
Seita.8G208100.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Solyc03g043640 No alias Heavy metal transport/detoxification superfamily protein... 0.04 Orthogroups_2024-Update
Solyc07g055010 No alias Heavy metal transport/detoxification superfamily protein... 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0046872 metal ion binding IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0004519 endonuclease activity IEP Predicted GO
MF GO:0004521 endoribonuclease activity IEP Predicted GO
MF GO:0004523 RNA-DNA hybrid ribonuclease activity IEP Predicted GO
MF GO:0004540 ribonuclease activity IEP Predicted GO
MF GO:0004650 polygalacturonase activity IEP Predicted GO
MF GO:0016491 oxidoreductase activity IEP Predicted GO
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Predicted GO
MF GO:0016717 oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water IEP Predicted GO
MF GO:0016891 endoribonuclease activity, producing 5'-phosphomonoesters IEP Predicted GO
MF GO:0016893 endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters IEP Predicted GO
InterPro domains Description Start Stop
IPR006121 HMA_dom 36 91
No external refs found!