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  5. Sobic.002G185000.1

Sobic.002G185000.1


Description : Unknown function


Gene families : OG_42_0002183 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0002183_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.002G185000.1
Cluster HCAA Clusters: Cluster_62

Target Alias Description ECC score Gene Family Method Actions
Glyma.10G103400 No alias zinc finger (C2H2 type, AN1-like) family protein 0.02 Orthogroups_2024-Update
Glyma.13G069200 No alias zinc finger (AN1-like) family protein 0.03 Orthogroups_2024-Update
Potri.011G138500 No alias zinc finger (AN1-like) family protein 0.04 Orthogroups_2024-Update
Solyc02g087210 No alias Zinc finger AN1 domain-containing stress-associated... 0.03 Orthogroups_2024-Update
Solyc04g015570 No alias Zinc finger AN1 and C2H2 domain-containing... 0.04 Orthogroups_2024-Update
Sopen02g031950 No alias AN1-like Zinc finger 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA 16Dec
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Type GO Term Name Evidence Source
BP GO:0002682 regulation of immune system process IEP Predicted GO
BP GO:0002831 regulation of response to biotic stimulus IEP Predicted GO
BP GO:0009719 response to endogenous stimulus IEP Predicted GO
BP GO:0009725 response to hormone IEP Predicted GO
BP GO:0009733 response to auxin IEP Predicted GO
BP GO:0010033 response to organic substance IEP Predicted GO
BP GO:0010112 regulation of systemic acquired resistance IEP Predicted GO
MF GO:0015298 solute:cation antiporter activity IEP Predicted GO
MF GO:0015299 solute:proton antiporter activity IEP Predicted GO
MF GO:0016651 oxidoreductase activity, acting on NAD(P)H IEP Predicted GO
BP GO:0031347 regulation of defense response IEP Predicted GO
BP GO:0032101 regulation of response to external stimulus IEP Predicted GO
BP GO:0042221 response to chemical IEP Predicted GO
BP GO:0043900 regulation of multi-organism process IEP Predicted GO
BP GO:0045088 regulation of innate immune response IEP Predicted GO
BP GO:0048583 regulation of response to stimulus IEP Predicted GO
MF GO:0050664 oxidoreductase activity, acting on NAD(P)H, oxygen as acceptor IEP Predicted GO
BP GO:0050776 regulation of immune response IEP Predicted GO
BP GO:0050896 response to stimulus IEP Predicted GO
BP GO:0080134 regulation of response to stress IEP Predicted GO
InterPro domains Description Start Stop
IPR000058 Znf_AN1 106 145
IPR000058 Znf_AN1 16 54
No external refs found!