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  5. Sobic.002G185800.1

Sobic.002G185800.1


Description : UMF15-type solute transporter


Gene families : OG_42_0000520 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000520_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.002G185800.1
Cluster HCAA Clusters: Cluster_228

Target Alias Description ECC score Gene Family Method Actions
Brara.A00192.1 No alias UMF15-type solute transporter 0.08 Orthogroups_2024-Update
Glyma.11G064100 No alias Major facilitator superfamily protein 0.06 Orthogroups_2024-Update
HORVU1Hr1G083330.4 No alias UMF15-type solute transporter 0.03 Orthogroups_2024-Update
LOC_Os08g31670 No alias transporter, putative, expressed 0.06 Orthogroups_2024-Update
PSME_00036710-RA No alias (at1g78130 : 617.0) unfertilized embryo sac 2 (UNE2);... 0.06 Orthogroups_2024-Update
Sopen04g029160 No alias Major Facilitator Superfamily 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0022857 transmembrane transporter activity IEA 16Dec
BP GO:0055085 transmembrane transport IEA 16Dec
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Type GO Term Name Evidence Source
BP GO:0006720 isoprenoid metabolic process IEP Predicted GO
BP GO:0006721 terpenoid metabolic process IEP Predicted GO
BP GO:0008299 isoprenoid biosynthetic process IEP Predicted GO
MF GO:0008661 1-deoxy-D-xylulose-5-phosphate synthase activity IEP Predicted GO
BP GO:0016114 terpenoid biosynthetic process IEP Predicted GO
MF GO:0016744 transferase activity, transferring aldehyde or ketonic groups IEP Predicted GO
InterPro domains Description Start Stop
IPR011701 MFS 25 383
No external refs found!