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  5. Sobic.002G186400.4

Sobic.002G186400.4


Description : Unknown function


Gene families : OG_42_0000102 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000102_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.002G186400.4
Cluster HCAA Clusters: Cluster_136

Target Alias Description ECC score Gene Family Method Actions
Glyma.13G211000 No alias F-box and associated interaction domains-containing protein 0.04 Orthogroups_2024-Update
Glyma.15G101600 No alias F-box and associated interaction domains-containing protein 0.05 Orthogroups_2024-Update
Glyma.20G075000 No alias F-box and associated interaction domains-containing protein 0.03 Orthogroups_2024-Update
Potri.010G207400 No alias F-box and associated interaction domains-containing protein 0.04 Orthogroups_2024-Update
Sopen05g001130 No alias F-box associated 0.02 Orthogroups_2024-Update
Sopen09g032150 No alias F-box domain 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0003887 DNA-directed DNA polymerase activity IEP Predicted GO
MF GO:0004527 exonuclease activity IEP Predicted GO
MF GO:0005516 calmodulin binding IEP Predicted GO
MF GO:0005524 ATP binding IEP Predicted GO
BP GO:0005984 disaccharide metabolic process IEP Predicted GO
BP GO:0005985 sucrose metabolic process IEP Predicted GO
MF GO:0008408 3'-5' exonuclease activity IEP Predicted GO
MF GO:0016157 sucrose synthase activity IEP Predicted GO
MF GO:0016740 transferase activity IEP Predicted GO
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Predicted GO
MF GO:0017076 purine nucleotide binding IEP Predicted GO
MF GO:0030554 adenyl nucleotide binding IEP Predicted GO
MF GO:0032553 ribonucleotide binding IEP Predicted GO
MF GO:0032555 purine ribonucleotide binding IEP Predicted GO
MF GO:0032559 adenyl ribonucleotide binding IEP Predicted GO
MF GO:0034061 DNA polymerase activity IEP Predicted GO
MF GO:0046983 protein dimerization activity IEP Predicted GO
MF GO:0097367 carbohydrate derivative binding IEP Predicted GO
InterPro domains Description Start Stop
IPR001810 F-box_dom 17 52
IPR013187 F-box-assoc_dom_typ3 202 300
No external refs found!