1. Home
  2. Species
  3. Sorghum bicolor
  4. Sequence
  5. Sobic.002G186600.1

Sobic.002G186600.1


Description : EC_4.3 carbon-nitrogen lyase


Gene families : OG_42_0000149 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000149_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.002G186600.1
Cluster HCAA Clusters: Cluster_14

Target Alias Description ECC score Gene Family Method Actions
A4A49_09595 No alias protein strictosidine synthase-like 2 0.03 Orthogroups_2024-Update
At1g74010 No alias At1g74010 [Source:UniProtKB/TrEMBL;Acc:Q9C9C2] 0.03 Orthogroups_2024-Update
Bradi1g59340 No alias Calcium-dependent phosphotriesterase superfamily protein 0.02 Orthogroups_2024-Update
Bradi1g67310 No alias Calcium-dependent phosphotriesterase superfamily protein 0.02 Orthogroups_2024-Update
Brara.E00215.1 No alias EC_4.3 carbon-nitrogen lyase 0.03 Orthogroups_2024-Update
Brara.G01721.1 No alias EC_4.3 carbon-nitrogen lyase 0.04 Orthogroups_2024-Update
Brara.G03215.1 No alias EC_4.3 carbon-nitrogen lyase 0.03 Orthogroups_2024-Update
Glyma.08G269600 No alias Calcium-dependent phosphotriesterase superfamily protein 0.04 Orthogroups_2024-Update
Glyma.15G029300 No alias Calcium-dependent phosphotriesterase superfamily protein 0.03 Orthogroups_2024-Update
Glyma.16G091100 No alias Calcium-dependent phosphotriesterase superfamily protein 0.03 Orthogroups_2024-Update
HORVU5Hr1G043200.4 No alias EC_4.3 carbon-nitrogen lyase 0.02 Orthogroups_2024-Update
HORVU5Hr1G058910.2 No alias EC_4.3 carbon-nitrogen lyase 0.03 Orthogroups_2024-Update
HORVU5Hr1G095260.4 No alias EC_4.3 carbon-nitrogen lyase 0.03 Orthogroups_2024-Update
Potri.015G037700 No alias strictosidine synthase 3 0.05 Orthogroups_2024-Update
Potri.016G037700 No alias strictosidine synthase-like 2 0.02 Orthogroups_2024-Update
Solyc03g114540 No alias Strictosidine synthase-like protein, putative (AHRD V3.3... 0.02 Orthogroups_2024-Update
Solyc07g055740 No alias strictosidine synthase 0.05 Orthogroups_2024-Update
Sopen06g030310 No alias Strictosidine synthase 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
BP GO:0009058 biosynthetic process IEA 16Dec
MF GO:0016844 strictosidine synthase activity IEA 16Dec
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004721 phosphoprotein phosphatase activity IEP Predicted GO
BP GO:0006163 purine nucleotide metabolic process IEP Predicted GO
BP GO:0006753 nucleoside phosphate metabolic process IEP Predicted GO
MF GO:0008138 protein tyrosine/serine/threonine phosphatase activity IEP Predicted GO
MF GO:0008519 ammonium transmembrane transporter activity IEP Predicted GO
BP GO:0009116 nucleoside metabolic process IEP Predicted GO
BP GO:0009117 nucleotide metabolic process IEP Predicted GO
BP GO:0009119 ribonucleoside metabolic process IEP Predicted GO
BP GO:0009150 purine ribonucleotide metabolic process IEP Predicted GO
BP GO:0009259 ribonucleotide metabolic process IEP Predicted GO
BP GO:0009690 cytokinin metabolic process IEP Predicted GO
BP GO:0010817 regulation of hormone levels IEP Predicted GO
BP GO:0015696 ammonium transport IEP Predicted GO
BP GO:0015969 guanosine tetraphosphate metabolic process IEP Predicted GO
BP GO:0015985 energy coupled proton transport, down electrochemical gradient IEP Predicted GO
BP GO:0015986 ATP synthesis coupled proton transport IEP Predicted GO
MF GO:0016307 phosphatidylinositol phosphate kinase activity IEP Predicted GO
MF GO:0016645 oxidoreductase activity, acting on the CH-NH group of donors IEP Predicted GO
MF GO:0019139 cytokinin dehydrogenase activity IEP Predicted GO
BP GO:0019637 organophosphate metabolic process IEP Predicted GO
BP GO:0019693 ribose phosphate metabolic process IEP Predicted GO
BP GO:0033865 nucleoside bisphosphate metabolic process IEP Predicted GO
BP GO:0033875 ribonucleoside bisphosphate metabolic process IEP Predicted GO
BP GO:0034032 purine nucleoside bisphosphate metabolic process IEP Predicted GO
BP GO:0034035 purine ribonucleoside bisphosphate metabolic process IEP Predicted GO
BP GO:0034220 ion transmembrane transport IEP Predicted GO
BP GO:0034754 cellular hormone metabolic process IEP Predicted GO
BP GO:0042278 purine nucleoside metabolic process IEP Predicted GO
MF GO:0042393 histone binding IEP Predicted GO
BP GO:0042445 hormone metabolic process IEP Predicted GO
MF GO:0043565 sequence-specific DNA binding IEP Predicted GO
BP GO:0046128 purine ribonucleoside metabolic process IEP Predicted GO
MF GO:0046933 proton-transporting ATP synthase activity, rotational mechanism IEP Predicted GO
MF GO:0050660 flavin adenine dinucleotide binding IEP Predicted GO
BP GO:0055086 nucleobase-containing small molecule metabolic process IEP Predicted GO
MF GO:0071949 FAD binding IEP Predicted GO
BP GO:0072488 ammonium transmembrane transport IEP Predicted GO
BP GO:0072521 purine-containing compound metabolic process IEP Predicted GO
BP GO:0098655 cation transmembrane transport IEP Predicted GO
BP GO:1901068 guanosine-containing compound metabolic process IEP Predicted GO
BP GO:1901657 glycosyl compound metabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR018119 Strictosidine_synth_cons-reg 162 249
No external refs found!