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  5. Sobic.002G193900.5

Sobic.002G193900.5


Description : type-I inositol-polyphosphate 5-phosphatase & EC_3.1 hydrolase acting on ester bond


Gene families : OG_42_0000152 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000152_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.002G193900.5
Cluster HCAA Clusters: Cluster_7

Target Alias Description ECC score Gene Family Method Actions
GRMZM2G335930 No alias DNAse I-like superfamily protein 0.02 Orthogroups_2024-Update
Glyma.07G107000 No alias DNAse I-like superfamily protein 0.02 Orthogroups_2024-Update
Glyma.11G007800 No alias CVP2 like 1 0.02 Orthogroups_2024-Update
HORVU3Hr1G020980.3 No alias Unknown function 0.02 Orthogroups_2024-Update
Potri.010G247800 No alias DNAse I-like superfamily protein 0.02 Orthogroups_2024-Update
Seita.3G165900.1 No alias type-I inositol-polyphosphate 5-phosphatase & EC_3.1... 0.03 Orthogroups_2024-Update
Solyc09g005690 No alias Type I inositol-1,4,5-trisphosphate 5-phosphatase... 0.02 Orthogroups_2024-Update
Sopen04g024630 No alias Endonuclease/Exonuclease/phosphatase family 0.03 Orthogroups_2024-Update
Sopen08g025770 No alias Endonuclease/Exonuclease/phosphatase family 0.02 Orthogroups_2024-Update
Sopen09g001580 No alias Endonuclease/Exonuclease/phosphatase family 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP Predicted GO
MF GO:0003677 DNA binding IEP Predicted GO
BP GO:0006355 regulation of transcription, DNA-templated IEP Predicted GO
BP GO:0009889 regulation of biosynthetic process IEP Predicted GO
BP GO:0010468 regulation of gene expression IEP Predicted GO
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Predicted GO
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Predicted GO
BP GO:0019222 regulation of metabolic process IEP Predicted GO
BP GO:0031323 regulation of cellular metabolic process IEP Predicted GO
BP GO:0031326 regulation of cellular biosynthetic process IEP Predicted GO
BP GO:0050789 regulation of biological process IEP Predicted GO
BP GO:0050794 regulation of cellular process IEP Predicted GO
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Predicted GO
BP GO:0051252 regulation of RNA metabolic process IEP Predicted GO
BP GO:0060255 regulation of macromolecule metabolic process IEP Predicted GO
BP GO:0065007 biological regulation IEP Predicted GO
BP GO:0080090 regulation of primary metabolic process IEP Predicted GO
MF GO:0097159 organic cyclic compound binding IEP Predicted GO
MF GO:1901363 heterocyclic compound binding IEP Predicted GO
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Predicted GO
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Predicted GO
BP GO:2001141 regulation of RNA biosynthetic process IEP Predicted GO
InterPro domains Description Start Stop
IPR005135 Endo/exonuclease/phosphatase 93 405
No external refs found!