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  5. Sobic.002G194500.1

Sobic.002G194500.1


Description : EC_2.4 glycosyltransferase


Gene families : OG_42_0000965 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000965_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.002G194500.1
Cluster HCAA Clusters: Cluster_267

Target Alias Description ECC score Gene Family Method Actions
At1g32170 No alias Probable xyloglucan endotransglucosylase/hydrolase... 0.03 Orthogroups_2024-Update
GRMZM2G060837 No alias xyloglucan endotransglucosylase/hydrolase 30 0.03 Orthogroups_2024-Update
Glyma.01G013900 No alias xyloglucan endotransglucosylase/hydrolase 30 0.03 Orthogroups_2024-Update
Glyma.05G138700 No alias xyloglucan endotransglucosylase/hydrolase 28 0.04 Orthogroups_2024-Update
Glyma.09G208300 No alias xyloglucan endotransglucosylase/hydrolase 30 0.01 Orthogroups_2024-Update
HORVU5Hr1G123920.1 No alias EC_2.4 glycosyltransferase 0.04 Orthogroups_2024-Update
LOC_Os09g23220 No alias glycosyl hydrolases family 16, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os10g02770 No alias glycosyl hydrolases family 16, putative, expressed 0.02 Orthogroups_2024-Update
MA_2873g0010 No alias (at1g10550 : 314.0) Encodes a membrane-localized protein... 0.03 Orthogroups_2024-Update
Seita.2G197200.1 No alias EC_2.4 glycosyltransferase 0.03 Orthogroups_2024-Update
Sobic.004G273200.1 No alias EC_2.4 glycosyltransferase 0.04 Orthogroups_2024-Update
Sopen04g003330 No alias Glycosyl hydrolases family 16 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEA 16Dec
CC GO:0005618 cell wall IEA 16Dec
BP GO:0005975 carbohydrate metabolic process IEA 16Dec
BP GO:0006073 cellular glucan metabolic process IEA 16Dec
MF GO:0016762 xyloglucan:xyloglucosyl transferase activity IEA 16Dec
CC GO:0048046 apoplast IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP Predicted GO
MF GO:0003746 translation elongation factor activity IEP Predicted GO
MF GO:0004834 tryptophan synthase activity IEP Predicted GO
CC GO:0005811 lipid droplet IEP Predicted GO
BP GO:0006355 regulation of transcription, DNA-templated IEP Predicted GO
BP GO:0006414 translational elongation IEP Predicted GO
BP GO:0006568 tryptophan metabolic process IEP Predicted GO
BP GO:0006576 cellular biogenic amine metabolic process IEP Predicted GO
BP GO:0006586 indolalkylamine metabolic process IEP Predicted GO
BP GO:0009606 tropism IEP Predicted GO
BP GO:0009889 regulation of biosynthetic process IEP Predicted GO
BP GO:0010215 cellulose microfibril organization IEP Predicted GO
BP GO:0010274 hydrotropism IEP Predicted GO
BP GO:0010468 regulation of gene expression IEP Predicted GO
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Predicted GO
CC GO:0012511 monolayer-surrounded lipid storage body IEP Predicted GO
CC GO:0016459 myosin complex IEP Predicted GO
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Predicted GO
BP GO:0019222 regulation of metabolic process IEP Predicted GO
BP GO:0030198 extracellular matrix organization IEP Predicted GO
BP GO:0031323 regulation of cellular metabolic process IEP Predicted GO
BP GO:0031326 regulation of cellular biosynthetic process IEP Predicted GO
BP GO:0042430 indole-containing compound metabolic process IEP Predicted GO
BP GO:0043062 extracellular structure organization IEP Predicted GO
BP GO:0044106 cellular amine metabolic process IEP Predicted GO
MF GO:0046872 metal ion binding IEP Predicted GO
BP GO:0050789 regulation of biological process IEP Predicted GO
BP GO:0050794 regulation of cellular process IEP Predicted GO
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Predicted GO
BP GO:0051252 regulation of RNA metabolic process IEP Predicted GO
BP GO:0060255 regulation of macromolecule metabolic process IEP Predicted GO
BP GO:0065007 biological regulation IEP Predicted GO
BP GO:0080090 regulation of primary metabolic process IEP Predicted GO
MF GO:0140110 transcription regulator activity IEP Predicted GO
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Predicted GO
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Predicted GO
BP GO:2001141 regulation of RNA biosynthetic process IEP Predicted GO
InterPro domains Description Start Stop
IPR010713 XET_C 271 305
IPR000757 GH16 58 228
No external refs found!