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  5. Sobic.002G201100.2

Sobic.002G201100.2


Description : zf-HD-type transcription factor


Gene families : OG_42_0000122 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000122_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.002G201100.2
Cluster HCAA Clusters: Cluster_49

Target Alias Description ECC score Gene Family Method Actions
At1g74660 No alias Mini zinc finger protein 1... 0.02 Orthogroups_2024-Update
Brara.C01035.1 No alias zf-HD-type transcription factor 0.02 Orthogroups_2024-Update
Glyma.20G036502 No alias zinc finger homeodomain 1 0.02 Orthogroups_2024-Update
HORVU2Hr1G075950.1 No alias zf-HD-type transcription factor 0.03 Orthogroups_2024-Update
LOC_Os09g29130 No alias ZF-HD protein dimerisation region containing protein, expressed 0.02 Orthogroups_2024-Update
MA_36755g0010 No alias (at3g28917 : 110.0) mini zinc finger 2 (MIF2); CONTAINS... 0.02 Orthogroups_2024-Update
Potri.004G126500 No alias homeobox protein 30 0.02 Orthogroups_2024-Update
Potri.017G082900 No alias homeobox protein 34 0.03 Orthogroups_2024-Update
Pp1s491_6V6 No alias ZF-HD homeobox protein At4g24660 (AtHB-22) [Arabidopsis thaliana] 0.02 Orthogroups_2024-Update
Seita.2G236300.1 No alias zf-HD-type transcription factor 0.02 Orthogroups_2024-Update
Sobic.008G073200.3 No alias zf-HD-type transcription factor 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0005544 calcium-dependent phospholipid binding IEP Predicted GO
MF GO:0015077 monovalent inorganic cation transmembrane transporter activity IEP Predicted GO
MF GO:0045300 acyl-[acyl-carrier-protein] desaturase activity IEP Predicted GO
InterPro domains Description Start Stop
IPR006456 ZF_HD_homeobox_Cys/His_dimer 42 94
No external refs found!