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  5. Sobic.002G202400.1

Sobic.002G202400.1


Description : deadenylase component *(CAF1) of mRNA deadenylation CCR4-NOT complex


Gene families : OG_42_0001501 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001501_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.002G202400.1
Cluster HCAA Clusters: Cluster_79

Target Alias Description ECC score Gene Family Method Actions
Potri.006G187200 No alias Polynucleotidyl transferase, ribonuclease H-like... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004175 endopeptidase activity IEP Predicted GO
MF GO:0004252 serine-type endopeptidase activity IEP Predicted GO
CC GO:0005575 cellular_component IEP Predicted GO
BP GO:0006457 protein folding IEP Predicted GO
MF GO:0008236 serine-type peptidase activity IEP Predicted GO
CC GO:0016272 prefoldin complex IEP Predicted GO
MF GO:0017171 serine hydrolase activity IEP Predicted GO
MF GO:0051082 unfolded protein binding IEP Predicted GO
InterPro domains Description Start Stop
IPR006941 RNase_CAF1 162 226
IPR006941 RNase_CAF1 17 138
No external refs found!