Sobic.002G205500.1

Description : catalytic component *(CesA) of cellulose synthase complex

Gene families : OG_42_0000159 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000159_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Sorghum bicolor: Sobic.002G205500.1
Cluster	HCAA Clusters: Cluster_26

Target	Alias	Description	ECC score	Gene Family Method
A4A49_05739	No alias	hypothetical protein	0.03	Orthogroups_2024-Update
A4A49_16242	No alias	putative cellulose synthase a catalytic subunit 3 [udp-forming]	0.02	Orthogroups_2024-Update
At2g25540	No alias	Cellulose synthase (Fragment)...	0.03	Orthogroups_2024-Update
At2g32620	No alias	Cellulose synthase-like protein B2...	0.02	Orthogroups_2024-Update
At4g15290	No alias	Glycosyltransferase (Fragment)...	0.02	Orthogroups_2024-Update
At4g15320	No alias	cellulose synthase-like B6 [Source:TAIR;Acc:AT4G15320]	0.03	Orthogroups_2024-Update
At4g18780	No alias	Cellulose synthase (Fragment)...	0.03	Orthogroups_2024-Update
At5g17420	No alias	Cellulose synthase (Fragment)...	0.04	Orthogroups_2024-Update
At5g44030	No alias	cellulose synthase A4 [Source:TAIR;Acc:AT5G44030]	0.03	Orthogroups_2024-Update
Bradi2g49912	No alias	cellulose synthase family protein	0.03	Orthogroups_2024-Update
Bradi3g28350	No alias	cellulose synthase A4	0.07	Orthogroups_2024-Update
Bradi4g30540	No alias	Cellulose synthase family protein	0.07	Orthogroups_2024-Update
Brara.B00711.1	No alias	catalytic component *(CesA) of cellulose synthase complex	0.05	Orthogroups_2024-Update
Brara.D01969.1	No alias	glycosyltransferase *(CSLB/CSLH)	0.02	Orthogroups_2024-Update
Glyma.02G205800	No alias	Cellulose synthase family protein	0.04	Orthogroups_2024-Update
Glyma.05G187300	No alias	cellulose synthase 6	0.02	Orthogroups_2024-Update
Glyma.06G316700	No alias	cellulose synthase A9	0.04	Orthogroups_2024-Update
Glyma.09G103000	No alias	Cellulose synthase family protein	0.03	Orthogroups_2024-Update
Glyma.12G191700	No alias	cellulose synthase-like B3	0.02	Orthogroups_2024-Update
Glyma.13G126000	No alias	cellulose synthase A4	0.04	Orthogroups_2024-Update
Glyma.17G072200	No alias	Cellulose synthase family protein	0.03	Orthogroups_2024-Update
HORVU3Hr1G071770.1	No alias	catalytic component *(CesA) of cellulose synthase complex	0.03	Orthogroups_2024-Update
LOC_Os04g35020	No alias	CSLH2 - cellulose synthase-like family H, expressed	0.03	Orthogroups_2024-Update
LOC_Os06g39970	No alias	CESA11 - cellulose synthase, expressed	0.02	Orthogroups_2024-Update
MA_6914679g0010	No alias	(at1g55850 : 87.0) encodes a protein similar to...	0.02	Orthogroups_2024-Update
PSME_00015179-RA	No alias	(at5g17420 : 1472.0) Encodes a xylem-specific cellulose...	0.03	Orthogroups_2024-Update
Potri.002G257900	No alias	cellulose synthase A4	0.05	Orthogroups_2024-Update
Potri.004G059600	No alias	cellulose synthase family protein	0.05	Orthogroups_2024-Update
Potri.006G181900	No alias	Cellulose synthase family protein	0.05	Orthogroups_2024-Update
Seita.2G209100.1	No alias	catalytic component *(CesA) of cellulose synthase complex	0.04	Orthogroups_2024-Update
Seita.5G319100.1	No alias	catalytic component *(CesA) of cellulose synthase complex	0.07	Orthogroups_2024-Update
Seita.9G227400.1	No alias	catalytic component *(CesA) of cellulose synthase complex	0.1	Orthogroups_2024-Update
Sobic.002G075500.1	No alias	catalytic component *(CesA) of cellulose synthase complex	0.04	Orthogroups_2024-Update
Solyc09g072820	No alias	Cellulose synthase (AHRD V3.3 *** M5VVD4_PRUPE)	0.08	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
BP	GO:0000271	polysaccharide biosynthetic process	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0005975	carbohydrate metabolic process	None	Extended
BP	GO:0005976	polysaccharide metabolic process	None	Extended
BP	GO:0006073	cellular glucan metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
MF	GO:0008194	UDP-glycosyltransferase activity	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009059	macromolecule biosynthetic process	None	Extended
BP	GO:0009250	glucan biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
CC	GO:0016020	membrane	IEA	16Dec
BP	GO:0016051	carbohydrate biosynthetic process	None	Extended
MF	GO:0016740	transferase activity	None	Extended
MF	GO:0016757	transferase activity, transferring glycosyl groups	None	Extended
MF	GO:0016758	transferase activity, transferring hexosyl groups	None	Extended
MF	GO:0016759	cellulose synthase activity	None	Extended
MF	GO:0016760	cellulose synthase (UDP-forming) activity	IEA	16Dec
BP	GO:0030243	cellulose metabolic process	None	Extended
BP	GO:0030244	cellulose biosynthetic process	IEA	16Dec
BP	GO:0033692	cellular polysaccharide biosynthetic process	None	Extended
BP	GO:0034637	cellular carbohydrate biosynthetic process	None	Extended
BP	GO:0034645	cellular macromolecule biosynthetic process	None	Extended
MF	GO:0035251	UDP-glucosyltransferase activity	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0044042	glucan metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044262	cellular carbohydrate metabolic process	None	Extended
BP	GO:0044264	cellular polysaccharide metabolic process	None	Extended
MF	GO:0046527	glucosyltransferase activity	None	Extended
BP	GO:0051273	beta-glucan metabolic process	None	Extended
BP	GO:0051274	beta-glucan biosynthetic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0005102	signaling receptor binding	IEP	Predicted GO
MF	GO:0005507	copper ion binding	IEP	Predicted GO
CC	GO:0005576	extracellular region	IEP	Predicted GO
MF	GO:0008083	growth factor activity	IEP	Predicted GO
BP	GO:0008283	cell proliferation	IEP	Predicted GO
MF	GO:0016491	oxidoreductase activity	IEP	Predicted GO
MF	GO:0016701	oxidoreductase activity, acting on single donors with incorporation of molecular oxygen	IEP	Predicted GO
MF	GO:0016702	oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen	IEP	Predicted GO
MF	GO:0030545	receptor regulator activity	IEP	Predicted GO
MF	GO:0043169	cation binding	IEP	Predicted GO
MF	GO:0046872	metal ion binding	IEP	Predicted GO
MF	GO:0046914	transition metal ion binding	IEP	Predicted GO
MF	GO:0048018	receptor ligand activity	IEP	Predicted GO
MF	GO:0051213	dioxygenase activity	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR005150	Cellulose_synth	341	1042
IPR027934	CES_Znf_RING	27	103

External Links

No external refs found!

Sobic.002G205500.1

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation