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  5. At3g47080

At3g47080


Description : Tetratricopeptide repeat (TPR)-like superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9SD65]


Gene families : OG_42_0002299 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0002299_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Arabidopsis release: At3g47080
Cluster HCCA clusters: Cluster_122

Target Alias Description ECC score Gene Family Method Actions
HORVU3Hr1G084970.2 No alias Unknown function 0.03 Orthogroups_2024-Update
MA_112570g0010 No alias (at1g07280 : 208.0) Tetratricopeptide repeat (TPR)-like... 0.03 Orthogroups_2024-Update
PSME_00055002-RA No alias (at2g29670 : 310.0) Tetratricopeptide repeat (TPR)-like... 0.04 Orthogroups_2024-Update
Sobic.003G360800.1 No alias Unknown function 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEP Predicted GO
MF GO:0003743 translation initiation factor activity IEP Predicted GO
MF GO:0004618 phosphoglycerate kinase activity IEP Predicted GO
BP GO:0006090 pyruvate metabolic process IEP Predicted GO
BP GO:0006096 glycolytic process IEP Predicted GO
BP GO:0006165 nucleoside diphosphate phosphorylation IEP Predicted GO
BP GO:0006413 translational initiation IEP Predicted GO
BP GO:0006757 ATP generation from ADP IEP Predicted GO
MF GO:0008097 5S rRNA binding IEP Predicted GO
BP GO:0009132 nucleoside diphosphate metabolic process IEP Predicted GO
BP GO:0009135 purine nucleoside diphosphate metabolic process IEP Predicted GO
BP GO:0009166 nucleotide catabolic process IEP Predicted GO
BP GO:0009179 purine ribonucleoside diphosphate metabolic process IEP Predicted GO
BP GO:0009185 ribonucleoside diphosphate metabolic process IEP Predicted GO
MF GO:0016774 phosphotransferase activity, carboxyl group as acceptor IEP Predicted GO
MF GO:0019843 rRNA binding IEP Predicted GO
MF GO:0031072 heat shock protein binding IEP Predicted GO
BP GO:0034404 nucleobase-containing small molecule biosynthetic process IEP Predicted GO
BP GO:0042866 pyruvate biosynthetic process IEP Predicted GO
BP GO:0046031 ADP metabolic process IEP Predicted GO
BP GO:0046939 nucleotide phosphorylation IEP Predicted GO
MF GO:0051082 unfolded protein binding IEP Predicted GO
BP GO:1901292 nucleoside phosphate catabolic process IEP Predicted GO

No InterPro domains available for this sequence

No external refs found!