Sobic.002G208800.2


Description : ligand-gated cation channel *(GLR)


Gene families : OG_42_0000065 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000065_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.002G208800.2
Cluster HCAA Clusters: Cluster_2

Target Alias Description ECC score Gene Family Method Actions
At3g07520 No alias Glutamate receptor 1.4 [Source:UniProtKB/Swiss-Prot;Acc:Q8LGN1] 0.03 Orthogroups_2024-Update
At5g11180 No alias Glutamate receptor 2.6 [Source:UniProtKB/Swiss-Prot;Acc:Q9LFN8] 0.03 Orthogroups_2024-Update
Brara.D01500.1 No alias ligand-gated cation channel *(GLR) 0.03 Orthogroups_2024-Update
Glyma.16G061701 No alias glutamate receptor 2 0.03 Orthogroups_2024-Update
HORVU7Hr1G081410.3 No alias ligand-gated cation channel *(GLR) 0.03 Orthogroups_2024-Update
LOC_Os06g08880 No alias glutamate receptor 2.7 precursor, putative, expressed 0.02 Orthogroups_2024-Update
Seita.1G009400.1 No alias ligand-gated cation channel *(GLR) 0.02 Orthogroups_2024-Update
Seita.4G260900.1 No alias ligand-gated cation channel *(GLR) 0.03 Orthogroups_2024-Update
Sobic.002G208700.1 No alias ligand-gated cation channel *(GLR) 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0015276 ligand-gated ion channel activity IEA 16Dec
CC GO:0016020 membrane IEA 16Dec
Type GO Term Name Evidence Source
MF GO:0008107 galactoside 2-alpha-L-fucosyltransferase activity IEP Predicted GO
MF GO:0008417 fucosyltransferase activity IEP Predicted GO
BP GO:0009719 response to endogenous stimulus IEP Predicted GO
BP GO:0009725 response to hormone IEP Predicted GO
BP GO:0009733 response to auxin IEP Predicted GO
BP GO:0010033 response to organic substance IEP Predicted GO
MF GO:0031127 alpha-(1,2)-fucosyltransferase activity IEP Predicted GO
BP GO:0042221 response to chemical IEP Predicted GO
BP GO:0042546 cell wall biogenesis IEP Predicted GO
MF GO:0046983 protein dimerization activity IEP Predicted GO
InterPro domains Description Start Stop
IPR001638 Solute-binding_3/MltF_N 490 815
IPR001828 ANF_lig-bd_rcpt 54 405
IPR001320 Iontro_rcpt 816 845
No external refs found!