1. Home
  2. Species
  3. Sorghum bicolor
  4. Sequence
  5. Sobic.002G214200.1

Sobic.002G214200.1


Description : NADPH-oxidase *(Rboh)


Gene families : OG_42_0000215 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000215_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.002G214200.1
Cluster HCAA Clusters: Cluster_240

Target Alias Description ECC score Gene Family Method Actions
266977 No alias respiratory burst oxidase protein F 0.03 Orthogroups_2024-Update
At3g45810 No alias Putative respiratory burst oxidase homolog protein J... 0.05 Orthogroups_2024-Update
At4g25090 No alias Putative respiratory burst oxidase homolog protein G... 0.04 Orthogroups_2024-Update
Bradi2g19090 No alias respiratory burst oxidase protein F 0.03 Orthogroups_2024-Update
LOC_Os09g26660 No alias ferric reductase, putative, expressed 0.02 Orthogroups_2024-Update
MA_18674g0010 No alias (at1g64060 : 1149.0) Interacts with AtrbohD gene to fine... 0.02 Orthogroups_2024-Update
PSME_00049135-RA No alias (at4g25090 : 149.0) Riboflavin synthase-like superfamily... 0.05 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0004601 peroxidase activity IEA 16Dec
MF GO:0016491 oxidoreductase activity IEA 16Dec
MF GO:0050664 oxidoreductase activity, acting on NAD(P)H, oxygen as acceptor IEA 16Dec
Toggle parental
Type GO Term Name Evidence Source
CC GO:0005667 transcription factor complex IEP Predicted GO
BP GO:0008037 cell recognition IEP Predicted GO
MF GO:0015018 galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase activity IEP Predicted GO
MF GO:0015020 glucuronosyltransferase activity IEP Predicted GO
BP GO:0022414 reproductive process IEP Predicted GO
BP GO:0048544 recognition of pollen IEP Predicted GO
InterPro domains Description Start Stop
IPR013130 Fe3_Rdtase_TM_dom 476 643
IPR013121 Fe_red_NAD-bd_6 807 988
IPR013623 NADPH_Ox 186 288
IPR013112 FAD-bd_8 686 800
No external refs found!