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  5. Sobic.002G214800.1

Sobic.002G214800.1


Description : TIFY-type transcription factor


Gene families : OG_42_0000349 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000349_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.002G214800.1
Cluster HCAA Clusters: Cluster_203

Target Alias Description ECC score Gene Family Method Actions
A4A49_10090 No alias protein tify 10a 0.02 Orthogroups_2024-Update
Bradi4g31240 No alias jasmonate-zim-domain protein 1 0.04 Orthogroups_2024-Update
LOC_Os03g08330 No alias ZIM domain containing protein, putative, expressed 0.02 Orthogroups_2024-Update
Seita.2G388400.1 No alias component *(JAZ) of jasmonic acid receptor complex &... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0005216 ion channel activity IEP Predicted GO
MF GO:0008270 zinc ion binding IEP Predicted GO
MF GO:0015276 ligand-gated ion channel activity IEP Predicted GO
MF GO:0022834 ligand-gated channel activity IEP Predicted GO
MF GO:0022836 gated channel activity IEP Predicted GO
MF GO:0022838 substrate-specific channel activity IEP Predicted GO
MF GO:0022839 ion gated channel activity IEP Predicted GO
MF GO:0043169 cation binding IEP Predicted GO
MF GO:0046872 metal ion binding IEP Predicted GO
MF GO:0046914 transition metal ion binding IEP Predicted GO
InterPro domains Description Start Stop
IPR010399 Tify_dom 102 131
IPR018467 CCT_CS 165 190
No external refs found!