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  5. Sobic.002G222600.1

Sobic.002G222600.1


Description : A1-class (Pepsin) protease & EC_3.4 hydrolase acting on peptide bond (peptidase)


Gene families : OG_42_0000019 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000019_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.002G222600.1
Cluster HCAA Clusters: Cluster_150

Target Alias Description ECC score Gene Family Method Actions
64135 No alias Eukaryotic aspartyl protease family protein 0.02 Orthogroups_2024-Update
Brara.A02929.1 No alias A1-class (Pepsin) protease & EC_3.4 hydrolase acting on... 0.03 Orthogroups_2024-Update
Brara.H00678.1 No alias A1-class (Pepsin) protease 0.03 Orthogroups_2024-Update
Glyma.03G257900 No alias Eukaryotic aspartyl protease family protein 0.04 Orthogroups_2024-Update
Glyma.08G321100 No alias Eukaryotic aspartyl protease family protein 0.06 Orthogroups_2024-Update
Mp5g16430.1 No alias pepsin-type protease 0.02 Orthogroups_2024-Update
PSME_00052081-RA No alias (at2g03200 : 124.0) Eukaryotic aspartyl protease family... 0.03 Orthogroups_2024-Update
Potri.005G063000 No alias Eukaryotic aspartyl protease family protein 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0006633 fatty acid biosynthetic process IEP Predicted GO
MF GO:0051536 iron-sulfur cluster binding IEP Predicted GO
MF GO:0051540 metal cluster binding IEP Predicted GO
InterPro domains Description Start Stop
IPR032861 TAXi_N 92 255
IPR032799 TAXi_C 283 437
No external refs found!