Sobic.002G224200.1

Description : HSF-type transcription factor

Gene families : OG_42_0000092 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000092_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Sorghum bicolor: Sobic.002G224200.1
Cluster	HCAA Clusters: Cluster_16

Target	Alias	Description	ECC score	Gene Family Method
At1g67970	No alias	Heat stress transcription factor A-8...	0.02	Orthogroups_2024-Update
At4g36990	No alias	Heat stress transcription factor B-1...	0.05	Orthogroups_2024-Update
Brara.B02421.1	No alias	HSF-type transcription factor	0.02	Orthogroups_2024-Update
Brara.C02130.1	No alias	HSF-type transcription factor	0.02	Orthogroups_2024-Update
Brara.J01849.1	No alias	transcriptional regulator *(HsfA1) & HSF-type...	0.03	Orthogroups_2024-Update
GRMZM2G098696	No alias	heat shock transcription factor B2A	0.03	Orthogroups_2024-Update
Glyma.01G185800	No alias	heat shock factor 4	0.03	Orthogroups_2024-Update
Glyma.05G095900	No alias	heat shock factor 4	0.03	Orthogroups_2024-Update
Glyma.07G086400	No alias	heat shock transcription factor C1	0.03	Orthogroups_2024-Update
HORVU7Hr1G056820.1	No alias	HSF-type transcription factor	0.04	Orthogroups_2024-Update
LOC_Os01g54550	No alias	HSF-type DNA-binding domain containing protein, expressed	0.03	Orthogroups_2024-Update
LOC_Os03g06630	No alias	heat stress transcription factor, putative, expressed	0.02	Orthogroups_2024-Update
LOC_Os03g53340	No alias	HSF-type DNA-binding domain containing protein, expressed	0.02	Orthogroups_2024-Update
MA_5374g0010	No alias	(at1g46264 : 191.0) Encodes SCHIZORIZA, a member of Heat...	0.02	Orthogroups_2024-Update
Potri.011G071700	No alias	heat shock transcription factor A4A	0.02	Orthogroups_2024-Update
Pp1s19_153V6	No alias	heat shock transcription factor	0.05	Orthogroups_2024-Update
Sobic.001G496200.1	No alias	HSF-type transcription factor	0.02	Orthogroups_2024-Update
Solyc04g078770	No alias	SolycHsfB4a	0.03	Orthogroups_2024-Update
Solyc11g064990	No alias	SolycHsfB4b	0.02	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	IEA	16Dec
MF	GO:0005488	binding	None	Extended
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	16Dec
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
MF	GO:0043565	sequence-specific DNA binding	IEA	16Dec
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0006260	DNA replication	IEP	Predicted GO
BP	GO:0006511	ubiquitin-dependent protein catabolic process	IEP	Predicted GO
BP	GO:0006631	fatty acid metabolic process	IEP	Predicted GO
BP	GO:0009057	macromolecule catabolic process	IEP	Predicted GO
BP	GO:0009987	cellular process	IEP	Predicted GO
MF	GO:0016717	oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water	IEP	Predicted GO
BP	GO:0019941	modification-dependent protein catabolic process	IEP	Predicted GO
MF	GO:0030599	pectinesterase activity	IEP	Predicted GO
BP	GO:0032787	monocarboxylic acid metabolic process	IEP	Predicted GO
BP	GO:0042545	cell wall modification	IEP	Predicted GO
BP	GO:0043632	modification-dependent macromolecule catabolic process	IEP	Predicted GO
BP	GO:0044265	cellular macromolecule catabolic process	IEP	Predicted GO
BP	GO:0045229	external encapsulating structure organization	IEP	Predicted GO
MF	GO:0045300	acyl-[acyl-carrier-protein] desaturase activity	IEP	Predicted GO
BP	GO:0051603	proteolysis involved in cellular protein catabolic process	IEP	Predicted GO
MF	GO:0052689	carboxylic ester hydrolase activity	IEP	Predicted GO
BP	GO:0071554	cell wall organization or biogenesis	IEP	Predicted GO
BP	GO:0071555	cell wall organization	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR000232	HSF_DNA-bd	27	117

External Links

No external refs found!

Sobic.002G224200.1

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation