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  5. Sobic.002G224800.1

Sobic.002G224800.1


Description : Unknown function


Gene families : OG_42_0000013 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000013_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.002G224800.1
Cluster HCAA Clusters: Cluster_125

Target Alias Description ECC score Gene Family Method Actions
A4A49_02997 No alias putative carboxylesterase 15 0.02 Orthogroups_2024-Update
A4A49_36363 No alias putative carboxylesterase 2 0.04 Orthogroups_2024-Update
A4A49_42901 No alias putative carboxylesterase 1 0.04 Orthogroups_2024-Update
Bradi1g45930 No alias alpha/beta-Hydrolases superfamily protein 0.04 Orthogroups_2024-Update
Bradi3g38090 No alias carboxyesterase 13 0.03 Orthogroups_2024-Update
GRMZM2G026095 No alias carboxyesterase 13 0.02 Orthogroups_2024-Update
GRMZM2G065471 No alias alpha/beta-Hydrolases superfamily protein 0.03 Orthogroups_2024-Update
GRMZM2G128219 No alias alpha/beta-Hydrolases superfamily protein 0.02 Orthogroups_2024-Update
GRMZM2G156310 No alias alpha/beta-Hydrolases superfamily protein 0.04 Orthogroups_2024-Update
Glyma.01G239300 No alias alpha/beta-Hydrolases superfamily protein 0.03 Orthogroups_2024-Update
Glyma.01G239400 No alias alpha/beta-Hydrolases superfamily protein 0.03 Orthogroups_2024-Update
Glyma.03G205400 No alias alpha/beta-Hydrolases superfamily protein 0.04 Orthogroups_2024-Update
Glyma.20G113800 No alias carboxyesterase 17 0.03 Orthogroups_2024-Update
Glyma.20G153300 No alias carboxyesterase 20 0.03 Orthogroups_2024-Update
HORVU2Hr1G093140.1 No alias Unknown function 0.05 Orthogroups_2024-Update
LOC_Os03g57640 No alias gibberellin receptor GID1L2, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os07g06880 No alias gibberellin receptor GID1L2, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os07g34370 No alias gibberellin receptor, putative, expressed 0.03 Orthogroups_2024-Update
LOC_Os09g28660 No alias gibberellin receptor GID1L2, putative, expressed 0.03 Orthogroups_2024-Update
MA_131537g0010 No alias (at5g23530 : 188.0) carboxyesterase 18 (CXE18); CONTAINS... 0.03 Orthogroups_2024-Update
PSME_00018406-RA No alias (at5g06570 : 281.0) alpha/beta-Hydrolases superfamily... 0.02 Orthogroups_2024-Update
PSME_00035833-RA No alias (at3g48700 : 215.0) carboxyesterase 13 (CXE13);... 0.02 Orthogroups_2024-Update
PSME_00055576-RA No alias (at5g23530 : 212.0) carboxyesterase 18 (CXE18); CONTAINS... 0.03 Orthogroups_2024-Update
Potri.009G104000 No alias alpha/beta-Hydrolases superfamily protein 0.03 Orthogroups_2024-Update
Potri.009G155800 No alias alpha/beta-Hydrolases superfamily protein 0.02 Orthogroups_2024-Update
Seita.1G154500.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Seita.2G039500.1 No alias Unknown function 0.07 Orthogroups_2024-Update
Seita.2G232500.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Seita.2G232600.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Seita.2G233100.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Seita.8G083000.1 No alias Unknown function 0.06 Orthogroups_2024-Update
Sobic.001G063000.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Sobic.002G041533.1 No alias Unknown function 0.05 Orthogroups_2024-Update
Sobic.002G042200.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Sobic.002G228400.1 No alias Unknown function 0.06 Orthogroups_2024-Update
Sobic.002G370000.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Sobic.007G157100.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Solyc01g108530 No alias Acetyl esterase IPR013094 Alpha_beta hydrolase fold-3 0.04 Orthogroups_2024-Update
Solyc01g108560 No alias Acetyl esterase IPR013094 Alpha_beta hydrolase fold-3 0.02 Orthogroups_2024-Update
Solyc01g108580 No alias Gibberellin receptor GID1L2 IPR013094 Alpha_beta... 0.03 Orthogroups_2024-Update
evm.model.tig00021128.13 No alias no hits & (original description: no original description) 0.01 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0016787 hydrolase activity IEA 16Dec
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Type GO Term Name Evidence Source
BP GO:0000096 sulfur amino acid metabolic process IEP Predicted GO
MF GO:0004489 methylenetetrahydrofolate reductase (NAD(P)H) activity IEP Predicted GO
MF GO:0004611 phosphoenolpyruvate carboxykinase activity IEP Predicted GO
MF GO:0005216 ion channel activity IEP Predicted GO
BP GO:0006082 organic acid metabolic process IEP Predicted GO
BP GO:0006099 tricarboxylic acid cycle IEP Predicted GO
BP GO:0006101 citrate metabolic process IEP Predicted GO
BP GO:0006555 methionine metabolic process IEP Predicted GO
BP GO:0006631 fatty acid metabolic process IEP Predicted GO
BP GO:0006790 sulfur compound metabolic process IEP Predicted GO
MF GO:0008964 phosphoenolpyruvate carboxylase activity IEP Predicted GO
BP GO:0009066 aspartate family amino acid metabolic process IEP Predicted GO
BP GO:0009141 nucleoside triphosphate metabolic process IEP Predicted GO
BP GO:0009143 nucleoside triphosphate catabolic process IEP Predicted GO
MF GO:0015276 ligand-gated ion channel activity IEP Predicted GO
BP GO:0015977 carbon fixation IEP Predicted GO
MF GO:0016491 oxidoreductase activity IEP Predicted GO
MF GO:0016645 oxidoreductase activity, acting on the CH-NH group of donors IEP Predicted GO
MF GO:0016646 oxidoreductase activity, acting on the CH-NH group of donors, NAD or NADP as acceptor IEP Predicted GO
MF GO:0016717 oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water IEP Predicted GO
MF GO:0016830 carbon-carbon lyase activity IEP Predicted GO
MF GO:0016831 carboxy-lyase activity IEP Predicted GO
BP GO:0016999 antibiotic metabolic process IEP Predicted GO
BP GO:0019439 aromatic compound catabolic process IEP Predicted GO
BP GO:0019752 carboxylic acid metabolic process IEP Predicted GO
MF GO:0022834 ligand-gated channel activity IEP Predicted GO
MF GO:0022836 gated channel activity IEP Predicted GO
MF GO:0022838 substrate-specific channel activity IEP Predicted GO
MF GO:0022839 ion gated channel activity IEP Predicted GO
BP GO:0034404 nucleobase-containing small molecule biosynthetic process IEP Predicted GO
BP GO:0034655 nucleobase-containing compound catabolic process IEP Predicted GO
BP GO:0043436 oxoacid metabolic process IEP Predicted GO
BP GO:0044270 cellular nitrogen compound catabolic process IEP Predicted GO
BP GO:0044281 small molecule metabolic process IEP Predicted GO
MF GO:0045300 acyl-[acyl-carrier-protein] desaturase activity IEP Predicted GO
BP GO:0046434 organophosphate catabolic process IEP Predicted GO
BP GO:0046700 heterocycle catabolic process IEP Predicted GO
MF GO:0047429 nucleoside-triphosphate diphosphatase activity IEP Predicted GO
BP GO:0072350 tricarboxylic acid metabolic process IEP Predicted GO
BP GO:1901292 nucleoside phosphate catabolic process IEP Predicted GO
BP GO:1901361 organic cyclic compound catabolic process IEP Predicted GO
BP GO:1901605 alpha-amino acid metabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR013094 AB_hydrolase_3 82 301
No external refs found!