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  5. Sobic.002G226000.1

Sobic.002G226000.1


Description : Unknown function


Gene families : OG_42_0004036 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0004036_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.002G226000.1
Cluster HCAA Clusters: Cluster_83

Target Alias Description ECC score Gene Family Method Actions
HORVU5Hr1G068360.2 No alias Unknown function 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000139 Golgi membrane IEP Predicted GO
BP GO:0000381 regulation of alternative mRNA splicing, via spliceosome IEP Predicted GO
MF GO:0004190 aspartic-type endopeptidase activity IEP Predicted GO
MF GO:0004806 triglyceride lipase activity IEP Predicted GO
MF GO:0005516 calmodulin binding IEP Predicted GO
CC GO:0005789 endoplasmic reticulum membrane IEP Predicted GO
BP GO:0006464 cellular protein modification process IEP Predicted GO
BP GO:0006476 protein deacetylation IEP Predicted GO
BP GO:0006810 transport IEP Predicted GO
BP GO:0006886 intracellular protein transport IEP Predicted GO
BP GO:0006890 retrograde vesicle-mediated transport, Golgi to ER IEP Predicted GO
BP GO:0006906 vesicle fusion IEP Predicted GO
BP GO:0007034 vacuolar transport IEP Predicted GO
BP GO:0008104 protein localization IEP Predicted GO
BP GO:0008150 biological_process IEP Predicted GO
BP GO:0015031 protein transport IEP Predicted GO
BP GO:0015833 peptide transport IEP Predicted GO
BP GO:0016050 vesicle organization IEP Predicted GO
BP GO:0016192 vesicle-mediated transport IEP Predicted GO
MF GO:0016298 lipase activity IEP Predicted GO
BP GO:0016575 histone deacetylation IEP Predicted GO
CC GO:0031011 Ino80 complex IEP Predicted GO
BP GO:0033036 macromolecule localization IEP Predicted GO
CC GO:0033202 DNA helicase complex IEP Predicted GO
BP GO:0035601 protein deacylation IEP Predicted GO
BP GO:0036211 protein modification process IEP Predicted GO
BP GO:0042886 amide transport IEP Predicted GO
BP GO:0043484 regulation of RNA splicing IEP Predicted GO
MF GO:0044183 protein binding involved in protein folding IEP Predicted GO
CC GO:0044454 nuclear chromosome part IEP Predicted GO
BP GO:0045048 protein insertion into ER membrane IEP Predicted GO
BP GO:0045184 establishment of protein localization IEP Predicted GO
BP GO:0046907 intracellular transport IEP Predicted GO
BP GO:0048024 regulation of mRNA splicing, via spliceosome IEP Predicted GO
BP GO:0048280 vesicle fusion with Golgi apparatus IEP Predicted GO
BP GO:0048284 organelle fusion IEP Predicted GO
BP GO:0050684 regulation of mRNA processing IEP Predicted GO
BP GO:0051179 localization IEP Predicted GO
BP GO:0051205 protein insertion into membrane IEP Predicted GO
BP GO:0051234 establishment of localization IEP Predicted GO
BP GO:0051641 cellular localization IEP Predicted GO
BP GO:0051649 establishment of localization in cell IEP Predicted GO
BP GO:0061024 membrane organization IEP Predicted GO
BP GO:0061025 membrane fusion IEP Predicted GO
MF GO:0070001 aspartic-type peptidase activity IEP Predicted GO
CC GO:0070603 SWI/SNF superfamily-type complex IEP Predicted GO
BP GO:0072657 protein localization to membrane IEP Predicted GO
BP GO:0090150 establishment of protein localization to membrane IEP Predicted GO
BP GO:0090174 organelle membrane fusion IEP Predicted GO
CC GO:0097346 INO80-type complex IEP Predicted GO
BP GO:0098732 macromolecule deacylation IEP Predicted GO
BP GO:1903311 regulation of mRNA metabolic process IEP Predicted GO
CC GO:1904949 ATPase complex IEP Predicted GO
InterPro domains Description Start Stop
IPR024788 Malectin-like_Carb-bd_dom 31 366
IPR013210 LRR_N_plant-typ 376 413
No external refs found!